Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Usp6nlQ80XC3 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.22
Usp6nlQ80XC3 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Usp6nlQ80XC3 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Usp6nlQ80XC3 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Usp6nlQ80XC3 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Usp6nlQ80XC3 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Usp6nlQ80XC3 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC16.39■□□□□ 0.21
Usp6nlQ80XC3 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Usp6nlQ80XC3 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Usp6nlQ80XC3 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Usp6nlQ80XC3 Gm8242-201ENSMUST00000193029 1420 ntBASIC16.39■□□□□ 0.21
Usp6nlQ80XC3 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Usp6nlQ80XC3 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Usp6nlQ80XC3 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Usp6nlQ80XC3 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Usp6nlQ80XC3 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Usp6nlQ80XC3 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Usp6nlQ80XC3 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC16.39■□□□□ 0.21
Usp6nlQ80XC3 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
Usp6nlQ80XC3 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
Usp6nlQ80XC3 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC16.39■□□□□ 0.21
Usp6nlQ80XC3 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC16.39■□□□□ 0.21
Usp6nlQ80XC3 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Usp6nlQ80XC3 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Usp6nlQ80XC3 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Usp6nlQ80XC3 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Usp6nlQ80XC3 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Usp6nlQ80XC3 Gm3365-201ENSMUST00000216296 1480 ntBASIC16.39■□□□□ 0.21
Usp6nlQ80XC3 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Usp6nlQ80XC3 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Usp6nlQ80XC3 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Usp6nlQ80XC3 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Usp6nlQ80XC3 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Usp6nlQ80XC3 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Usp6nlQ80XC3 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Usp6nlQ80XC3 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Usp6nlQ80XC3 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Usp6nlQ80XC3 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC16.38■□□□□ 0.21
Usp6nlQ80XC3 Gm6756-201ENSMUST00000180647 1620 ntBASIC16.38■□□□□ 0.21
Usp6nlQ80XC3 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Usp6nlQ80XC3 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Usp6nlQ80XC3 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Usp6nlQ80XC3 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Usp6nlQ80XC3 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Usp6nlQ80XC3 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Usp6nlQ80XC3 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Usp6nlQ80XC3 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Usp6nlQ80XC3 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Usp6nlQ80XC3 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Usp6nlQ80XC3 Gm43438-201ENSMUST00000198133 379 ntBASIC16.38■□□□□ 0.21
Usp6nlQ80XC3 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Usp6nlQ80XC3 AC090659.2-201ENSMUST00000225378 1186 ntBASIC16.38■□□□□ 0.21
Usp6nlQ80XC3 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Usp6nlQ80XC3 Hist1h2al-201ENSMUST00000091708 339 ntBASIC16.38■□□□□ 0.21
Usp6nlQ80XC3 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Usp6nlQ80XC3 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Usp6nlQ80XC3 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Usp6nlQ80XC3 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Usp6nlQ80XC3 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp6nlQ80XC3 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp6nlQ80XC3 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp6nlQ80XC3 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp6nlQ80XC3 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp6nlQ80XC3 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp6nlQ80XC3 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp6nlQ80XC3 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.37■□□□□ 0.21
Usp6nlQ80XC3 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp6nlQ80XC3 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Usp6nlQ80XC3 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC16.37■□□□□ 0.21
Usp6nlQ80XC3 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC16.37■□□□□ 0.21
Usp6nlQ80XC3 Gm24694-201ENSMUST00000180054 110 ntBASIC16.37■□□□□ 0.21
Usp6nlQ80XC3 Gm27663-201ENSMUST00000184839 110 ntBASIC16.37■□□□□ 0.21
Usp6nlQ80XC3 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC16.37■□□□□ 0.21
Usp6nlQ80XC3 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp6nlQ80XC3 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Usp6nlQ80XC3 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Usp6nlQ80XC3 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp6nlQ80XC3 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp6nlQ80XC3 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Usp6nlQ80XC3 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp6nlQ80XC3 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp6nlQ80XC3 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Usp6nlQ80XC3 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Usp6nlQ80XC3 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Usp6nlQ80XC3 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Usp6nlQ80XC3 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Usp6nlQ80XC3 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Usp6nlQ80XC3 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Usp6nlQ80XC3 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Usp6nlQ80XC3 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Usp6nlQ80XC3 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Usp6nlQ80XC3 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Usp6nlQ80XC3 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC16.36■□□□□ 0.21
Usp6nlQ80XC3 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC16.36■□□□□ 0.21
Usp6nlQ80XC3 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC16.36■□□□□ 0.21
Usp6nlQ80XC3 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Usp6nlQ80XC3 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC16.36■□□□□ 0.21
Usp6nlQ80XC3 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Usp6nlQ80XC3 Gm6473-201ENSMUST00000188572 1210 ntBASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms