Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim36Q80WG7 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim36Q80WG7 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim36Q80WG7 Gm4609-201ENSMUST00000106443 1002 ntBASIC14.38□□□□□ -0.11
Trim36Q80WG7 Gm5138-201ENSMUST00000113842 1002 ntBASIC14.38□□□□□ -0.11
Trim36Q80WG7 Gm15191-201ENSMUST00000117933 1000 ntBASIC14.38□□□□□ -0.11
Trim36Q80WG7 Gm12182-201ENSMUST00000118655 1008 ntBASIC14.38□□□□□ -0.11
Trim36Q80WG7 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.38□□□□□ -0.11
Trim36Q80WG7 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC14.38□□□□□ -0.11
Trim36Q80WG7 Gm12497-201ENSMUST00000138778 237 ntBASIC14.38□□□□□ -0.11
Trim36Q80WG7 Gm10284-201ENSMUST00000145057 1005 ntBASIC14.38□□□□□ -0.11
Trim36Q80WG7 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim36Q80WG7 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim36Q80WG7 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim36Q80WG7 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC14.38□□□□□ -0.11
Trim36Q80WG7 Gm7230-201ENSMUST00000173026 815 ntBASIC14.38□□□□□ -0.11
Trim36Q80WG7 Mir5126-201ENSMUST00000175513 77 ntBASIC14.38□□□□□ -0.11
Trim36Q80WG7 Gm10481-201ENSMUST00000179228 1002 ntBASIC14.38□□□□□ -0.11
Trim36Q80WG7 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC14.38□□□□□ -0.11
Trim36Q80WG7 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14.38□□□□□ -0.11
Trim36Q80WG7 Gm2574-201ENSMUST00000181051 1002 ntBASIC14.38□□□□□ -0.11
Trim36Q80WG7 Gm3200-201ENSMUST00000181493 1002 ntBASIC14.38□□□□□ -0.11
Trim36Q80WG7 Gm8825-201ENSMUST00000182565 998 ntBASIC14.38□□□□□ -0.11
Trim36Q80WG7 Gm4518-201ENSMUST00000182638 718 ntBASIC14.38□□□□□ -0.11
Trim36Q80WG7 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.38□□□□□ -0.11
Trim36Q80WG7 Gm4575-201ENSMUST00000182991 1002 ntBASIC14.38□□□□□ -0.11
Trim36Q80WG7 Gm8709-201ENSMUST00000183230 1012 ntBASIC14.38□□□□□ -0.11
Trim36Q80WG7 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC14.38□□□□□ -0.11
Trim36Q80WG7 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.38□□□□□ -0.11
Trim36Q80WG7 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim36Q80WG7 Gm10293-201ENSMUST00000076317 1002 ntBASIC14.38□□□□□ -0.11
Trim36Q80WG7 Gm6316-201ENSMUST00000082064 1020 ntBASIC14.38□□□□□ -0.11
Trim36Q80WG7 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Trim36Q80WG7 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim36Q80WG7 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim36Q80WG7 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim36Q80WG7 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim36Q80WG7 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Trim36Q80WG7 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim36Q80WG7 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim36Q80WG7 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim36Q80WG7 Efs-202ENSMUST00000227037 2540 ntBASIC14.38□□□□□ -0.11
Trim36Q80WG7 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim36Q80WG7 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim36Q80WG7 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim36Q80WG7 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim36Q80WG7 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trim36Q80WG7 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim36Q80WG7 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim36Q80WG7 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim36Q80WG7 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim36Q80WG7 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
Trim36Q80WG7 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim36Q80WG7 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim36Q80WG7 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim36Q80WG7 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trim36Q80WG7 Gm15173-201ENSMUST00000122049 433 ntBASIC14.37□□□□□ -0.11
Trim36Q80WG7 Gm11780-201ENSMUST00000136880 516 ntBASIC14.37□□□□□ -0.11
Trim36Q80WG7 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim36Q80WG7 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.37□□□□□ -0.11
Trim36Q80WG7 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC14.37□□□□□ -0.11
Trim36Q80WG7 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim36Q80WG7 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
Trim36Q80WG7 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim36Q80WG7 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim36Q80WG7 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim36Q80WG7 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim36Q80WG7 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Trim36Q80WG7 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim36Q80WG7 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Trim36Q80WG7 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Trim36Q80WG7 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim36Q80WG7 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim36Q80WG7 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.37□□□□□ -0.11
Trim36Q80WG7 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim36Q80WG7 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim36Q80WG7 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.36□□□□□ -0.11
Trim36Q80WG7 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim36Q80WG7 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim36Q80WG7 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Trim36Q80WG7 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim36Q80WG7 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.36□□□□□ -0.11
Trim36Q80WG7 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.36□□□□□ -0.11
Trim36Q80WG7 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim36Q80WG7 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.36□□□□□ -0.11
Trim36Q80WG7 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trim36Q80WG7 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim36Q80WG7 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim36Q80WG7 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim36Q80WG7 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Trim36Q80WG7 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim36Q80WG7 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim36Q80WG7 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Trim36Q80WG7 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim36Q80WG7 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trim36Q80WG7 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trim36Q80WG7 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim36Q80WG7 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.36□□□□□ -0.11
Trim36Q80WG7 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC14.36□□□□□ -0.11
Trim36Q80WG7 Gm18622-201ENSMUST00000219361 595 ntBASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms