Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC15.58■□□□□ 0.08
Prpf38bQ80SY5 Gm2574-201ENSMUST00000181051 1002 ntBASIC15.58■□□□□ 0.08
Prpf38bQ80SY5 Gm3200-201ENSMUST00000181493 1002 ntBASIC15.58■□□□□ 0.08
Prpf38bQ80SY5 Gm4518-201ENSMUST00000182638 718 ntBASIC15.58■□□□□ 0.08
Prpf38bQ80SY5 Gm8330-201ENSMUST00000182754 1008 ntBASIC15.58■□□□□ 0.08
Prpf38bQ80SY5 Gm4575-201ENSMUST00000182991 1002 ntBASIC15.58■□□□□ 0.08
Prpf38bQ80SY5 Gm8709-201ENSMUST00000183230 1012 ntBASIC15.58■□□□□ 0.08
Prpf38bQ80SY5 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC15.58■□□□□ 0.08
Prpf38bQ80SY5 AC093926.2-201ENSMUST00000214468 1228 ntBASIC15.58■□□□□ 0.08
Prpf38bQ80SY5 Cdk7-205ENSMUST00000225990 1159 ntBASIC15.58■□□□□ 0.08
Prpf38bQ80SY5 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Prpf38bQ80SY5 Gm2423-201ENSMUST00000074863 733 ntBASIC15.58■□□□□ 0.08
Prpf38bQ80SY5 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Prpf38bQ80SY5 Gm10293-201ENSMUST00000076317 1002 ntBASIC15.58■□□□□ 0.08
Prpf38bQ80SY5 Gm6316-201ENSMUST00000082064 1020 ntBASIC15.58■□□□□ 0.08
Prpf38bQ80SY5 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Prpf38bQ80SY5 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Prpf38bQ80SY5 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Prpf38bQ80SY5 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Prpf38bQ80SY5 Gm16425-201ENSMUST00000118143 3130 ntBASIC15.58■□□□□ 0.08
Prpf38bQ80SY5 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Prpf38bQ80SY5 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC15.58■□□□□ 0.08
Prpf38bQ80SY5 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Prpf38bQ80SY5 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Prpf38bQ80SY5 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Prpf38bQ80SY5 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Prpf38bQ80SY5 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Prpf38bQ80SY5 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Prpf38bQ80SY5 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Prpf38bQ80SY5 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Prpf38bQ80SY5 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC15.57■□□□□ 0.08
Prpf38bQ80SY5 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Prpf38bQ80SY5 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Prpf38bQ80SY5 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Prpf38bQ80SY5 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Prpf38bQ80SY5 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Prpf38bQ80SY5 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Prpf38bQ80SY5 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Prpf38bQ80SY5 Gm27528-202ENSMUST00000222916 2012 ntBASIC15.57■□□□□ 0.08
Prpf38bQ80SY5 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC15.57■□□□□ 0.08
Prpf38bQ80SY5 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Prpf38bQ80SY5 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Prpf38bQ80SY5 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Prpf38bQ80SY5 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC15.57■□□□□ 0.08
Prpf38bQ80SY5 Gm6912-201ENSMUST00000117218 544 ntBASIC15.57■□□□□ 0.08
Prpf38bQ80SY5 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Prpf38bQ80SY5 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC15.57■□□□□ 0.08
Prpf38bQ80SY5 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC15.57■□□□□ 0.08
Prpf38bQ80SY5 Thap2-203ENSMUST00000218989 527 ntBASIC15.57■□□□□ 0.08
Prpf38bQ80SY5 AC147366.1-201ENSMUST00000227671 852 ntBASIC15.57■□□□□ 0.08
Prpf38bQ80SY5 AC131710.1-201ENSMUST00000228336 990 ntBASIC15.57■□□□□ 0.08
Prpf38bQ80SY5 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Prpf38bQ80SY5 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Prpf38bQ80SY5 Gm13294-201ENSMUST00000121757 1330 ntBASIC15.57■□□□□ 0.08
Prpf38bQ80SY5 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
Prpf38bQ80SY5 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Prpf38bQ80SY5 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC15.57■□□□□ 0.08
Prpf38bQ80SY5 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Prpf38bQ80SY5 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Prpf38bQ80SY5 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Prpf38bQ80SY5 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Prpf38bQ80SY5 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Prpf38bQ80SY5 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Prpf38bQ80SY5 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Prpf38bQ80SY5 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Prpf38bQ80SY5 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Prpf38bQ80SY5 Gm7488-201ENSMUST00000117148 684 ntBASIC15.56■□□□□ 0.08
Prpf38bQ80SY5 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Prpf38bQ80SY5 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC15.56■□□□□ 0.08
Prpf38bQ80SY5 Gm12151-201ENSMUST00000121374 290 ntBASIC15.56■□□□□ 0.08
Prpf38bQ80SY5 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Prpf38bQ80SY5 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Prpf38bQ80SY5 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC15.56■□□□□ 0.08
Prpf38bQ80SY5 Gm9794-201ENSMUST00000202370 423 ntBASIC15.56■□□□□ 0.08
Prpf38bQ80SY5 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Prpf38bQ80SY5 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC15.56■□□□□ 0.08
Prpf38bQ80SY5 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Prpf38bQ80SY5 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Prpf38bQ80SY5 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.56■□□□□ 0.08
Prpf38bQ80SY5 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Prpf38bQ80SY5 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Prpf38bQ80SY5 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Prpf38bQ80SY5 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Prpf38bQ80SY5 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Prpf38bQ80SY5 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Prpf38bQ80SY5 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Prpf38bQ80SY5 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Prpf38bQ80SY5 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Prpf38bQ80SY5 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Prpf38bQ80SY5 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Prpf38bQ80SY5 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Prpf38bQ80SY5 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC15.56■□□□□ 0.08
Prpf38bQ80SY5 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.56■□□□□ 0.08
Prpf38bQ80SY5 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Prpf38bQ80SY5 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Prpf38bQ80SY5 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Prpf38bQ80SY5 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Prpf38bQ80SY5 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Prpf38bQ80SY5 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Prpf38bQ80SY5 Gm42934-201ENSMUST00000196920 1345 ntBASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms