Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC18.26■□□□□ 0.51
Trim27Q62158 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Trim27Q62158 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim27Q62158 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim27Q62158 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim27Q62158 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC18.26■□□□□ 0.51
Trim27Q62158 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim27Q62158 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim27Q62158 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim27Q62158 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim27Q62158 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Trim27Q62158 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim27Q62158 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim27Q62158 Gm8096-201ENSMUST00000209921 1591 ntBASIC18.25■□□□□ 0.51
Trim27Q62158 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim27Q62158 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim27Q62158 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim27Q62158 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim27Q62158 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim27Q62158 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim27Q62158 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim27Q62158 AC162938.1-201ENSMUST00000213140 2323 ntBASIC18.25■□□□□ 0.51
Trim27Q62158 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim27Q62158 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim27Q62158 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim27Q62158 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
Trim27Q62158 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC18.25■□□□□ 0.51
Trim27Q62158 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trim27Q62158 AC090659.1-201ENSMUST00000224334 768 ntBASIC18.25■□□□□ 0.51
Trim27Q62158 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim27Q62158 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim27Q62158 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim27Q62158 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim27Q62158 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trim27Q62158 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim27Q62158 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim27Q62158 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim27Q62158 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim27Q62158 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trim27Q62158 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim27Q62158 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Trim27Q62158 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim27Q62158 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC18.24■□□□□ 0.51
Trim27Q62158 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim27Q62158 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC18.24■□□□□ 0.51
Trim27Q62158 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim27Q62158 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Trim27Q62158 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim27Q62158 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC18.24■□□□□ 0.51
Trim27Q62158 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim27Q62158 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC18.24■□□□□ 0.51
Trim27Q62158 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trim27Q62158 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC18.24■□□□□ 0.51
Trim27Q62158 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim27Q62158 Gm4691-201ENSMUST00000182339 1000 ntBASIC18.24■□□□□ 0.51
Trim27Q62158 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim27Q62158 Gm2451-201ENSMUST00000199447 999 ntBASIC18.24■□□□□ 0.51
Trim27Q62158 Gm10290-201ENSMUST00000200451 999 ntBASIC18.24■□□□□ 0.51
Trim27Q62158 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC18.24■□□□□ 0.51
Trim27Q62158 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim27Q62158 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim27Q62158 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim27Q62158 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Trim27Q62158 Gm12620-201ENSMUST00000119791 1986 ntBASIC18.24■□□□□ 0.51
Trim27Q62158 Gm12612-201ENSMUST00000140182 1986 ntBASIC18.24■□□□□ 0.51
Trim27Q62158 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trim27Q62158 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Trim27Q62158 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC18.23■□□□□ 0.51
Trim27Q62158 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim27Q62158 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim27Q62158 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim27Q62158 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim27Q62158 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim27Q62158 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim27Q62158 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim27Q62158 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim27Q62158 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trim27Q62158 AC164565.1-201ENSMUST00000217520 1484 ntBASIC18.23■□□□□ 0.51
Trim27Q62158 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC18.23■□□□□ 0.51
Trim27Q62158 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trim27Q62158 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim27Q62158 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim27Q62158 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim27Q62158 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim27Q62158 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC18.23■□□□□ 0.51
Trim27Q62158 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim27Q62158 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim27Q62158 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim27Q62158 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim27Q62158 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim27Q62158 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim27Q62158 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC18.23■□□□□ 0.51
Trim27Q62158 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trim27Q62158 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim27Q62158 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Trim27Q62158 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim27Q62158 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC18.22■□□□□ 0.51
Trim27Q62158 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Trim27Q62158 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC18.22■□□□□ 0.51
Trim27Q62158 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms