Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Foxc1Q61572 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC11.01□□□□□ -0.65
Foxc1Q61572 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Foxc1Q61572 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Foxc1Q61572 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Foxc1Q61572 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Foxc1Q61572 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Foxc1Q61572 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Foxc1Q61572 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Foxc1Q61572 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Foxc1Q61572 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Foxc1Q61572 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Foxc1Q61572 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Foxc1Q61572 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Foxc1Q61572 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Foxc1Q61572 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Foxc1Q61572 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Foxc1Q61572 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC11□□□□□ -0.65
Foxc1Q61572 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Foxc1Q61572 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Foxc1Q61572 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC11□□□□□ -0.65
Foxc1Q61572 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC11□□□□□ -0.65
Foxc1Q61572 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Foxc1Q61572 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC11□□□□□ -0.65
Foxc1Q61572 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Foxc1Q61572 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Foxc1Q61572 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Foxc1Q61572 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Foxc1Q61572 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Foxc1Q61572 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Foxc1Q61572 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Foxc1Q61572 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Foxc1Q61572 Gm11185-201ENSMUST00000117732 1007 ntBASIC11□□□□□ -0.65
Foxc1Q61572 Gm13036-201ENSMUST00000117799 748 ntBASIC11□□□□□ -0.65
Foxc1Q61572 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Foxc1Q61572 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Foxc1Q61572 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC11□□□□□ -0.65
Foxc1Q61572 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC11□□□□□ -0.65
Foxc1Q61572 Gm42670-201ENSMUST00000201816 1292 ntBASIC11□□□□□ -0.65
Foxc1Q61572 Gm7787-201ENSMUST00000216858 688 ntBASIC11□□□□□ -0.65
Foxc1Q61572 Olfr258-ps1-202ENSMUST00000218625 1085 ntTSL 5 BASIC11□□□□□ -0.65
Foxc1Q61572 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC11□□□□□ -0.65
Foxc1Q61572 AC122024.2-201ENSMUST00000220086 871 ntBASIC11□□□□□ -0.65
Foxc1Q61572 AC154222.1-201ENSMUST00000223882 475 ntBASIC11□□□□□ -0.65
Foxc1Q61572 CT009495.1-201ENSMUST00000224221 862 ntBASIC11□□□□□ -0.65
Foxc1Q61572 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC11□□□□□ -0.65
Foxc1Q61572 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Foxc1Q61572 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Foxc1Q61572 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Foxc1Q61572 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Foxc1Q61572 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC11□□□□□ -0.65
Foxc1Q61572 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Foxc1Q61572 Gm45760-201ENSMUST00000212190 1782 ntBASIC11□□□□□ -0.65
Foxc1Q61572 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Foxc1Q61572 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC11□□□□□ -0.65
Foxc1Q61572 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC11□□□□□ -0.65
Foxc1Q61572 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Foxc1Q61572 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Foxc1Q61572 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Foxc1Q61572 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Foxc1Q61572 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Foxc1Q61572 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Foxc1Q61572 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Foxc1Q61572 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Foxc1Q61572 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Foxc1Q61572 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Foxc1Q61572 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Foxc1Q61572 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Foxc1Q61572 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Foxc1Q61572 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Foxc1Q61572 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Foxc1Q61572 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Foxc1Q61572 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Foxc1Q61572 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Foxc1Q61572 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Foxc1Q61572 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Foxc1Q61572 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Foxc1Q61572 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Foxc1Q61572 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Foxc1Q61572 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Foxc1Q61572 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC10.99□□□□□ -0.65
Foxc1Q61572 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC10.99□□□□□ -0.65
Foxc1Q61572 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Foxc1Q61572 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC10.99□□□□□ -0.65
Foxc1Q61572 Gm27397-201ENSMUST00000184997 107 ntBASIC10.99□□□□□ -0.65
Foxc1Q61572 CT943659.1-201ENSMUST00000215459 326 ntBASIC10.99□□□□□ -0.65
Foxc1Q61572 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC10.99□□□□□ -0.65
Foxc1Q61572 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Foxc1Q61572 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Foxc1Q61572 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Foxc1Q61572 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Foxc1Q61572 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Foxc1Q61572 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Foxc1Q61572 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Foxc1Q61572 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Foxc1Q61572 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Foxc1Q61572 Gm37305-201ENSMUST00000195714 4279 ntBASIC10.99□□□□□ -0.65
Foxc1Q61572 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Foxc1Q61572 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Foxc1Q61572 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms