Protein–RNA interactions for Protein: Q61345

Foxd1, Forkhead box protein D1, mousemouse

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd1Q61345 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Foxd1Q61345 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Foxd1Q61345 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Foxd1Q61345 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC17.16■□□□□ 0.34
Foxd1Q61345 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Foxd1Q61345 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Foxd1Q61345 Gm38318-201ENSMUST00000195769 1706 ntBASIC17.16■□□□□ 0.34
Foxd1Q61345 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Foxd1Q61345 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC17.15■□□□□ 0.34
Foxd1Q61345 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Foxd1Q61345 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC17.15■□□□□ 0.34
Foxd1Q61345 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC17.15■□□□□ 0.34
Foxd1Q61345 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Foxd1Q61345 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Foxd1Q61345 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC17.15■□□□□ 0.34
Foxd1Q61345 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Foxd1Q61345 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Foxd1Q61345 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Foxd1Q61345 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Foxd1Q61345 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Foxd1Q61345 Gm14722-201ENSMUST00000118943 689 ntBASIC17.15■□□□□ 0.34
Foxd1Q61345 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC17.15■□□□□ 0.34
Foxd1Q61345 Gm11543-201ENSMUST00000120758 370 ntBASIC17.15■□□□□ 0.34
Foxd1Q61345 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC17.15■□□□□ 0.34
Foxd1Q61345 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Foxd1Q61345 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC17.15■□□□□ 0.34
Foxd1Q61345 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Foxd1Q61345 Gm38225-201ENSMUST00000194001 393 ntBASIC17.15■□□□□ 0.34
Foxd1Q61345 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Foxd1Q61345 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Foxd1Q61345 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Foxd1Q61345 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Foxd1Q61345 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Foxd1Q61345 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Foxd1Q61345 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Foxd1Q61345 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Foxd1Q61345 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Foxd1Q61345 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Foxd1Q61345 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC17.15■□□□□ 0.34
Foxd1Q61345 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Foxd1Q61345 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Foxd1Q61345 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Foxd1Q61345 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Foxd1Q61345 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Foxd1Q61345 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Foxd1Q61345 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Foxd1Q61345 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Foxd1Q61345 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Foxd1Q61345 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Foxd1Q61345 Gm15236-201ENSMUST00000117309 379 ntBASIC17.14■□□□□ 0.33
Foxd1Q61345 Gm13392-201ENSMUST00000117708 150 ntBASIC17.14■□□□□ 0.33
Foxd1Q61345 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC17.14■□□□□ 0.33
Foxd1Q61345 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC17.14■□□□□ 0.33
Foxd1Q61345 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC17.14■□□□□ 0.33
Foxd1Q61345 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Foxd1Q61345 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Foxd1Q61345 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC17.14■□□□□ 0.33
Foxd1Q61345 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC17.14■□□□□ 0.33
Foxd1Q61345 Gm44344-201ENSMUST00000200287 129 ntBASIC17.14■□□□□ 0.33
Foxd1Q61345 Gm7172-201ENSMUST00000218047 1152 ntBASIC17.14■□□□□ 0.33
Foxd1Q61345 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Foxd1Q61345 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Foxd1Q61345 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Foxd1Q61345 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Foxd1Q61345 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Foxd1Q61345 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Foxd1Q61345 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Foxd1Q61345 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Foxd1Q61345 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Foxd1Q61345 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Foxd1Q61345 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Foxd1Q61345 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Foxd1Q61345 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC17.14■□□□□ 0.33
Foxd1Q61345 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC17.14■□□□□ 0.33
Foxd1Q61345 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC17.14■□□□□ 0.33
Foxd1Q61345 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC17.14■□□□□ 0.33
Foxd1Q61345 Gm42853-201ENSMUST00000201273 1387 ntBASIC17.14■□□□□ 0.33
Foxd1Q61345 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Foxd1Q61345 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Foxd1Q61345 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Foxd1Q61345 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Foxd1Q61345 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Foxd1Q61345 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Foxd1Q61345 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Foxd1Q61345 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Foxd1Q61345 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Foxd1Q61345 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC17.13■□□□□ 0.33
Foxd1Q61345 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Foxd1Q61345 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Foxd1Q61345 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Foxd1Q61345 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Foxd1Q61345 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Foxd1Q61345 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC17.13■□□□□ 0.33
Foxd1Q61345 Gm44974-201ENSMUST00000206387 1279 ntBASIC17.13■□□□□ 0.33
Foxd1Q61345 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Foxd1Q61345 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Foxd1Q61345 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Foxd1Q61345 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Foxd1Q61345 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Foxd1Q61345 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms