Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc88aQ5SNZ0 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc88aQ5SNZ0 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC16.97■□□□□ 0.31
Ccdc88aQ5SNZ0 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc88aQ5SNZ0 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc88aQ5SNZ0 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC16.97■□□□□ 0.31
Ccdc88aQ5SNZ0 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc88aQ5SNZ0 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc88aQ5SNZ0 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc88aQ5SNZ0 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc88aQ5SNZ0 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc88aQ5SNZ0 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc88aQ5SNZ0 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc88aQ5SNZ0 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc88aQ5SNZ0 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC16.97■□□□□ 0.31
Ccdc88aQ5SNZ0 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc88aQ5SNZ0 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
Ccdc88aQ5SNZ0 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc88aQ5SNZ0 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc88aQ5SNZ0 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc88aQ5SNZ0 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc88aQ5SNZ0 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc88aQ5SNZ0 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc88aQ5SNZ0 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc88aQ5SNZ0 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC16.97■□□□□ 0.31
Ccdc88aQ5SNZ0 Gm6539-201ENSMUST00000119157 1064 ntBASIC16.97■□□□□ 0.31
Ccdc88aQ5SNZ0 Gm13464-201ENSMUST00000119418 935 ntBASIC16.97■□□□□ 0.31
Ccdc88aQ5SNZ0 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc88aQ5SNZ0 Gm43703-201ENSMUST00000200523 763 ntBASIC16.97■□□□□ 0.31
Ccdc88aQ5SNZ0 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC16.97■□□□□ 0.31
Ccdc88aQ5SNZ0 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc88aQ5SNZ0 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc88aQ5SNZ0 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Ccdc88aQ5SNZ0 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC16.96■□□□□ 0.31
Ccdc88aQ5SNZ0 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc88aQ5SNZ0 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc88aQ5SNZ0 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc88aQ5SNZ0 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc88aQ5SNZ0 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Ccdc88aQ5SNZ0 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC16.96■□□□□ 0.31
Ccdc88aQ5SNZ0 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc88aQ5SNZ0 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc88aQ5SNZ0 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc88aQ5SNZ0 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc88aQ5SNZ0 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Ccdc88aQ5SNZ0 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
Ccdc88aQ5SNZ0 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC16.96■□□□□ 0.31
Ccdc88aQ5SNZ0 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
Ccdc88aQ5SNZ0 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc88aQ5SNZ0 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc88aQ5SNZ0 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ccdc88aQ5SNZ0 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ccdc88aQ5SNZ0 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC16.96■□□□□ 0.3
Ccdc88aQ5SNZ0 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc88aQ5SNZ0 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC16.95■□□□□ 0.3
Ccdc88aQ5SNZ0 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc88aQ5SNZ0 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Ccdc88aQ5SNZ0 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Ccdc88aQ5SNZ0 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Ccdc88aQ5SNZ0 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc88aQ5SNZ0 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc88aQ5SNZ0 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc88aQ5SNZ0 Gm11478-201ENSMUST00000117851 599 ntBASIC16.95■□□□□ 0.3
Ccdc88aQ5SNZ0 Gm15653-201ENSMUST00000119247 907 ntBASIC16.95■□□□□ 0.3
Ccdc88aQ5SNZ0 AC155729.1-201ENSMUST00000227758 544 ntBASIC16.95■□□□□ 0.3
Ccdc88aQ5SNZ0 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Ccdc88aQ5SNZ0 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Ccdc88aQ5SNZ0 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Ccdc88aQ5SNZ0 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc88aQ5SNZ0 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.95■□□□□ 0.3
Ccdc88aQ5SNZ0 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc88aQ5SNZ0 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc88aQ5SNZ0 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC16.95■□□□□ 0.3
Ccdc88aQ5SNZ0 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Ccdc88aQ5SNZ0 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc88aQ5SNZ0 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc88aQ5SNZ0 Gm10584-201ENSMUST00000207036 2628 ntBASIC16.95■□□□□ 0.3
Ccdc88aQ5SNZ0 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc88aQ5SNZ0 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Ccdc88aQ5SNZ0 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc88aQ5SNZ0 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Ccdc88aQ5SNZ0 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc88aQ5SNZ0 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc88aQ5SNZ0 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC16.95■□□□□ 0.3
Ccdc88aQ5SNZ0 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Ccdc88aQ5SNZ0 Gm29310-201ENSMUST00000185468 696 ntBASIC16.95■□□□□ 0.3
Ccdc88aQ5SNZ0 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc88aQ5SNZ0 Gm21825-201ENSMUST00000185728 696 ntBASIC16.95■□□□□ 0.3
Ccdc88aQ5SNZ0 Gm29109-201ENSMUST00000185895 696 ntBASIC16.95■□□□□ 0.3
Ccdc88aQ5SNZ0 Gm21896-201ENSMUST00000186520 696 ntBASIC16.95■□□□□ 0.3
Ccdc88aQ5SNZ0 Gm21873-201ENSMUST00000186728 696 ntBASIC16.95■□□□□ 0.3
Ccdc88aQ5SNZ0 Gm21794-201ENSMUST00000187056 696 ntBASIC16.95■□□□□ 0.3
Ccdc88aQ5SNZ0 Gm21880-201ENSMUST00000187275 696 ntBASIC16.95■□□□□ 0.3
Ccdc88aQ5SNZ0 Gm21826-201ENSMUST00000187451 696 ntBASIC16.95■□□□□ 0.3
Ccdc88aQ5SNZ0 Gm21198-201ENSMUST00000188393 696 ntBASIC16.95■□□□□ 0.3
Ccdc88aQ5SNZ0 Gm21749-201ENSMUST00000189343 696 ntBASIC16.95■□□□□ 0.3
Ccdc88aQ5SNZ0 Gm21901-201ENSMUST00000189568 696 ntBASIC16.95■□□□□ 0.3
Ccdc88aQ5SNZ0 Gm29424-201ENSMUST00000189716 696 ntBASIC16.95■□□□□ 0.3
Ccdc88aQ5SNZ0 Gm28599-201ENSMUST00000189838 694 ntBASIC16.95■□□□□ 0.3
Ccdc88aQ5SNZ0 Gm21867-201ENSMUST00000189917 696 ntBASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms