Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav8d-1Q5R1H8 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav8d-1Q5R1H8 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav8d-1Q5R1H8 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav8d-1Q5R1H8 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC12.23□□□□□ -0.45
Trav8d-1Q5R1H8 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Trav8d-1Q5R1H8 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav8d-1Q5R1H8 Gm43205-201ENSMUST00000198622 1968 ntBASIC12.23□□□□□ -0.45
Trav8d-1Q5R1H8 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav8d-1Q5R1H8 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Trav8d-1Q5R1H8 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav8d-1Q5R1H8 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav8d-1Q5R1H8 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav8d-1Q5R1H8 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav8d-1Q5R1H8 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Trav8d-1Q5R1H8 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trav8d-1Q5R1H8 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav8d-1Q5R1H8 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trav8d-1Q5R1H8 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trav8d-1Q5R1H8 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trav8d-1Q5R1H8 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trav8d-1Q5R1H8 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC12.23□□□□□ -0.45
Trav8d-1Q5R1H8 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC12.23□□□□□ -0.45
Trav8d-1Q5R1H8 Gm10819-201ENSMUST00000099988 561 ntBASIC12.23□□□□□ -0.45
Trav8d-1Q5R1H8 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav8d-1Q5R1H8 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav8d-1Q5R1H8 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav8d-1Q5R1H8 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav8d-1Q5R1H8 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav8d-1Q5R1H8 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav8d-1Q5R1H8 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC12.23□□□□□ -0.45
Trav8d-1Q5R1H8 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav8d-1Q5R1H8 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav8d-1Q5R1H8 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav8d-1Q5R1H8 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav8d-1Q5R1H8 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav8d-1Q5R1H8 Gm5049-201ENSMUST00000195878 1590 ntBASIC12.22□□□□□ -0.45
Trav8d-1Q5R1H8 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav8d-1Q5R1H8 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trav8d-1Q5R1H8 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav8d-1Q5R1H8 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav8d-1Q5R1H8 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav8d-1Q5R1H8 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav8d-1Q5R1H8 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav8d-1Q5R1H8 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav8d-1Q5R1H8 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav8d-1Q5R1H8 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trav8d-1Q5R1H8 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav8d-1Q5R1H8 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC12.22□□□□□ -0.45
Trav8d-1Q5R1H8 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC12.22□□□□□ -0.45
Trav8d-1Q5R1H8 AC153794.1-201ENSMUST00000169148 126 ntBASIC12.22□□□□□ -0.45
Trav8d-1Q5R1H8 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav8d-1Q5R1H8 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC12.22□□□□□ -0.45
Trav8d-1Q5R1H8 AC108846.1-201ENSMUST00000214531 513 ntBASIC12.22□□□□□ -0.45
Trav8d-1Q5R1H8 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav8d-1Q5R1H8 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav8d-1Q5R1H8 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav8d-1Q5R1H8 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav8d-1Q5R1H8 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
Trav8d-1Q5R1H8 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav8d-1Q5R1H8 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav8d-1Q5R1H8 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav8d-1Q5R1H8 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Trav8d-1Q5R1H8 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav8d-1Q5R1H8 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC12.22□□□□□ -0.45
Trav8d-1Q5R1H8 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav8d-1Q5R1H8 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav8d-1Q5R1H8 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Trav8d-1Q5R1H8 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC12.22□□□□□ -0.45
Trav8d-1Q5R1H8 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trav8d-1Q5R1H8 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trav8d-1Q5R1H8 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav8d-1Q5R1H8 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav8d-1Q5R1H8 Gm9889-202ENSMUST00000206983 1577 ntBASIC12.22□□□□□ -0.45
Trav8d-1Q5R1H8 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav8d-1Q5R1H8 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav8d-1Q5R1H8 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC12.21□□□□□ -0.45
Trav8d-1Q5R1H8 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav8d-1Q5R1H8 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav8d-1Q5R1H8 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav8d-1Q5R1H8 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav8d-1Q5R1H8 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav8d-1Q5R1H8 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav8d-1Q5R1H8 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav8d-1Q5R1H8 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav8d-1Q5R1H8 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Trav8d-1Q5R1H8 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav8d-1Q5R1H8 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav8d-1Q5R1H8 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav8d-1Q5R1H8 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav8d-1Q5R1H8 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC12.21□□□□□ -0.45
Trav8d-1Q5R1H8 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav8d-1Q5R1H8 Gm6257-201ENSMUST00000163864 910 ntBASIC12.21□□□□□ -0.45
Trav8d-1Q5R1H8 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC12.21□□□□□ -0.45
Trav8d-1Q5R1H8 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC12.21□□□□□ -0.45
Trav8d-1Q5R1H8 AC153889.1-201ENSMUST00000219257 330 ntBASIC12.21□□□□□ -0.45
Trav8d-1Q5R1H8 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Trav8d-1Q5R1H8 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav8d-1Q5R1H8 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav8d-1Q5R1H8 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms