Protein–RNA interactions for Protein: Q5QNQ9

Col27a1, Collagen alpha-1(XXVII) chain, mousemouse

Predictions only

Length 1,845 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1Q5QNQ9 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC14.1□□□□□ -0.15
Col27a1Q5QNQ9 Gm5276-201ENSMUST00000196683 1047 ntBASIC14.1□□□□□ -0.15
Col27a1Q5QNQ9 Gm43758-201ENSMUST00000199500 367 ntBASIC14.1□□□□□ -0.15
Col27a1Q5QNQ9 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Col27a1Q5QNQ9 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col27a1Q5QNQ9 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC14.1□□□□□ -0.15
Col27a1Q5QNQ9 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col27a1Q5QNQ9 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col27a1Q5QNQ9 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col27a1Q5QNQ9 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col27a1Q5QNQ9 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC14.1□□□□□ -0.15
Col27a1Q5QNQ9 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col27a1Q5QNQ9 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col27a1Q5QNQ9 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC14.09□□□□□ -0.15
Col27a1Q5QNQ9 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Col27a1Q5QNQ9 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col27a1Q5QNQ9 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col27a1Q5QNQ9 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col27a1Q5QNQ9 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col27a1Q5QNQ9 Gm15240-201ENSMUST00000118156 720 ntBASIC14.09□□□□□ -0.15
Col27a1Q5QNQ9 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col27a1Q5QNQ9 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col27a1Q5QNQ9 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Col27a1Q5QNQ9 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col27a1Q5QNQ9 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Col27a1Q5QNQ9 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC14.09□□□□□ -0.15
Col27a1Q5QNQ9 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col27a1Q5QNQ9 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col27a1Q5QNQ9 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col27a1Q5QNQ9 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col27a1Q5QNQ9 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.09□□□□□ -0.15
Col27a1Q5QNQ9 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col27a1Q5QNQ9 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col27a1Q5QNQ9 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col27a1Q5QNQ9 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col27a1Q5QNQ9 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Col27a1Q5QNQ9 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC14.08□□□□□ -0.15
Col27a1Q5QNQ9 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC14.08□□□□□ -0.15
Col27a1Q5QNQ9 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC14.08□□□□□ -0.15
Col27a1Q5QNQ9 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.08□□□□□ -0.15
Col27a1Q5QNQ9 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Col27a1Q5QNQ9 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC14.08□□□□□ -0.15
Col27a1Q5QNQ9 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Col27a1Q5QNQ9 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.15
Col27a1Q5QNQ9 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC14.08□□□□□ -0.15
Col27a1Q5QNQ9 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Col27a1Q5QNQ9 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col27a1Q5QNQ9 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.08□□□□□ -0.16
Col27a1Q5QNQ9 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col27a1Q5QNQ9 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.08□□□□□ -0.16
Col27a1Q5QNQ9 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col27a1Q5QNQ9 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col27a1Q5QNQ9 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col27a1Q5QNQ9 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col27a1Q5QNQ9 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC14.08□□□□□ -0.16
Col27a1Q5QNQ9 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC14.08□□□□□ -0.16
Col27a1Q5QNQ9 Mir7070-201ENSMUST00000183657 86 ntBASIC14.08□□□□□ -0.16
Col27a1Q5QNQ9 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC14.08□□□□□ -0.16
Col27a1Q5QNQ9 Gm43094-201ENSMUST00000196549 921 ntBASIC14.08□□□□□ -0.16
Col27a1Q5QNQ9 Gm18056-201ENSMUST00000207670 568 ntBASIC14.08□□□□□ -0.16
Col27a1Q5QNQ9 Gm18061-201ENSMUST00000208350 562 ntBASIC14.08□□□□□ -0.16
Col27a1Q5QNQ9 Gm18063-201ENSMUST00000208529 568 ntBASIC14.08□□□□□ -0.16
Col27a1Q5QNQ9 Gm18052-201ENSMUST00000208750 559 ntBASIC14.08□□□□□ -0.16
Col27a1Q5QNQ9 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col27a1Q5QNQ9 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col27a1Q5QNQ9 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col27a1Q5QNQ9 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col27a1Q5QNQ9 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col27a1Q5QNQ9 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Col27a1Q5QNQ9 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col27a1Q5QNQ9 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col27a1Q5QNQ9 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.08□□□□□ -0.16
Col27a1Q5QNQ9 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col27a1Q5QNQ9 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Col27a1Q5QNQ9 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col27a1Q5QNQ9 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Col27a1Q5QNQ9 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Col27a1Q5QNQ9 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC14.07□□□□□ -0.16
Col27a1Q5QNQ9 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col27a1Q5QNQ9 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC14.07□□□□□ -0.16
Col27a1Q5QNQ9 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
Col27a1Q5QNQ9 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC14.07□□□□□ -0.16
Col27a1Q5QNQ9 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Col27a1Q5QNQ9 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC14.07□□□□□ -0.16
Col27a1Q5QNQ9 Gm22331-201ENSMUST00000158066 136 ntBASIC14.07□□□□□ -0.16
Col27a1Q5QNQ9 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Col27a1Q5QNQ9 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Col27a1Q5QNQ9 Gm7584-201ENSMUST00000175829 940 ntBASIC14.07□□□□□ -0.16
Col27a1Q5QNQ9 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC14.07□□□□□ -0.16
Col27a1Q5QNQ9 Gm29199-201ENSMUST00000187766 775 ntBASIC14.07□□□□□ -0.16
Col27a1Q5QNQ9 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC14.07□□□□□ -0.16
Col27a1Q5QNQ9 Gm38002-201ENSMUST00000193255 180 ntBASIC14.07□□□□□ -0.16
Col27a1Q5QNQ9 Gm43133-201ENSMUST00000197472 463 ntBASIC14.07□□□□□ -0.16
Col27a1Q5QNQ9 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col27a1Q5QNQ9 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col27a1Q5QNQ9 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col27a1Q5QNQ9 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Col27a1Q5QNQ9 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC14.07□□□□□ -0.16
Col27a1Q5QNQ9 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Col27a1Q5QNQ9 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms