Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rnf20Q5DTM8 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC17.72■□□□□ 0.43
Rnf20Q5DTM8 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rnf20Q5DTM8 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Rnf20Q5DTM8 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Rnf20Q5DTM8 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rnf20Q5DTM8 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
Rnf20Q5DTM8 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rnf20Q5DTM8 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rnf20Q5DTM8 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC17.71■□□□□ 0.43
Rnf20Q5DTM8 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rnf20Q5DTM8 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rnf20Q5DTM8 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rnf20Q5DTM8 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rnf20Q5DTM8 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rnf20Q5DTM8 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Rnf20Q5DTM8 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC17.71■□□□□ 0.43
Rnf20Q5DTM8 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Rnf20Q5DTM8 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC17.71■□□□□ 0.43
Rnf20Q5DTM8 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rnf20Q5DTM8 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rnf20Q5DTM8 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC17.71■□□□□ 0.43
Rnf20Q5DTM8 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rnf20Q5DTM8 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rnf20Q5DTM8 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
Rnf20Q5DTM8 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Rnf20Q5DTM8 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf20Q5DTM8 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf20Q5DTM8 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf20Q5DTM8 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Rnf20Q5DTM8 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf20Q5DTM8 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf20Q5DTM8 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf20Q5DTM8 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf20Q5DTM8 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf20Q5DTM8 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf20Q5DTM8 Gm37812-201ENSMUST00000195216 2475 ntBASIC17.7■□□□□ 0.42
Rnf20Q5DTM8 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf20Q5DTM8 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC17.7■□□□□ 0.42
Rnf20Q5DTM8 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC17.7■□□□□ 0.42
Rnf20Q5DTM8 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC17.7■□□□□ 0.42
Rnf20Q5DTM8 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC17.7■□□□□ 0.42
Rnf20Q5DTM8 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC17.7■□□□□ 0.42
Rnf20Q5DTM8 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC17.7■□□□□ 0.42
Rnf20Q5DTM8 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf20Q5DTM8 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC17.7■□□□□ 0.42
Rnf20Q5DTM8 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf20Q5DTM8 AC154222.1-201ENSMUST00000223882 475 ntBASIC17.7■□□□□ 0.42
Rnf20Q5DTM8 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf20Q5DTM8 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf20Q5DTM8 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC17.7■□□□□ 0.42
Rnf20Q5DTM8 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf20Q5DTM8 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Rnf20Q5DTM8 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf20Q5DTM8 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Rnf20Q5DTM8 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf20Q5DTM8 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf20Q5DTM8 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf20Q5DTM8 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf20Q5DTM8 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf20Q5DTM8 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf20Q5DTM8 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf20Q5DTM8 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf20Q5DTM8 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf20Q5DTM8 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf20Q5DTM8 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf20Q5DTM8 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf20Q5DTM8 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Rnf20Q5DTM8 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC17.69■□□□□ 0.42
Rnf20Q5DTM8 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC17.69■□□□□ 0.42
Rnf20Q5DTM8 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC17.69■□□□□ 0.42
Rnf20Q5DTM8 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Rnf20Q5DTM8 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf20Q5DTM8 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC17.69■□□□□ 0.42
Rnf20Q5DTM8 Gm2272-201ENSMUST00000194903 582 ntBASIC17.69■□□□□ 0.42
Rnf20Q5DTM8 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC17.69■□□□□ 0.42
Rnf20Q5DTM8 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf20Q5DTM8 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf20Q5DTM8 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf20Q5DTM8 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf20Q5DTM8 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf20Q5DTM8 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf20Q5DTM8 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf20Q5DTM8 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf20Q5DTM8 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf20Q5DTM8 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf20Q5DTM8 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Rnf20Q5DTM8 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Rnf20Q5DTM8 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Rnf20Q5DTM8 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Rnf20Q5DTM8 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf20Q5DTM8 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
Rnf20Q5DTM8 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Rnf20Q5DTM8 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf20Q5DTM8 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf20Q5DTM8 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC17.68■□□□□ 0.42
Rnf20Q5DTM8 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf20Q5DTM8 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf20Q5DTM8 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf20Q5DTM8 AC122901.1-201ENSMUST00000214203 1790 ntBASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms