Protein–RNA interactions for Protein: Q52KE7

Ccnl1, Cyclin-L1, mousemouse

Known RBP Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccnl1Q52KE7 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Ccnl1Q52KE7 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC18.7■□□□□ 0.58
Ccnl1Q52KE7 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccnl1Q52KE7 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccnl1Q52KE7 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccnl1Q52KE7 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Ccnl1Q52KE7 Gm21854-201ENSMUST00000179901 471 ntBASIC18.7■□□□□ 0.58
Ccnl1Q52KE7 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ccnl1Q52KE7 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccnl1Q52KE7 Gm5049-201ENSMUST00000195878 1590 ntBASIC18.7■□□□□ 0.58
Ccnl1Q52KE7 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccnl1Q52KE7 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Ccnl1Q52KE7 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccnl1Q52KE7 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccnl1Q52KE7 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccnl1Q52KE7 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Ccnl1Q52KE7 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccnl1Q52KE7 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ccnl1Q52KE7 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccnl1Q52KE7 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccnl1Q52KE7 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccnl1Q52KE7 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccnl1Q52KE7 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccnl1Q52KE7 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccnl1Q52KE7 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ccnl1Q52KE7 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC18.69■□□□□ 0.58
Ccnl1Q52KE7 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccnl1Q52KE7 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccnl1Q52KE7 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccnl1Q52KE7 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Ccnl1Q52KE7 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Ccnl1Q52KE7 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccnl1Q52KE7 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccnl1Q52KE7 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccnl1Q52KE7 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccnl1Q52KE7 Gm8602-201ENSMUST00000184045 607 ntBASIC18.69■□□□□ 0.58
Ccnl1Q52KE7 AC149294.4-201ENSMUST00000227870 882 ntBASIC18.69■□□□□ 0.58
Ccnl1Q52KE7 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccnl1Q52KE7 Gm9797-201ENSMUST00000052902 613 ntBASIC18.69■□□□□ 0.58
Ccnl1Q52KE7 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Ccnl1Q52KE7 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccnl1Q52KE7 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC18.69■□□□□ 0.58
Ccnl1Q52KE7 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccnl1Q52KE7 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ccnl1Q52KE7 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ccnl1Q52KE7 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Ccnl1Q52KE7 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.69■□□□□ 0.58
Ccnl1Q52KE7 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccnl1Q52KE7 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ccnl1Q52KE7 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccnl1Q52KE7 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ccnl1Q52KE7 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccnl1Q52KE7 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccnl1Q52KE7 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
Ccnl1Q52KE7 Gm28760-201ENSMUST00000185995 736 ntBASIC18.68■□□□□ 0.58
Ccnl1Q52KE7 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Ccnl1Q52KE7 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccnl1Q52KE7 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccnl1Q52KE7 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ccnl1Q52KE7 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC18.68■□□□□ 0.58
Ccnl1Q52KE7 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccnl1Q52KE7 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Ccnl1Q52KE7 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccnl1Q52KE7 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccnl1Q52KE7 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccnl1Q52KE7 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ccnl1Q52KE7 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccnl1Q52KE7 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
Ccnl1Q52KE7 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Ccnl1Q52KE7 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccnl1Q52KE7 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccnl1Q52KE7 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccnl1Q52KE7 Trav13-3-201ENSMUST00000117226 336 ntBASIC18.67■□□□□ 0.58
Ccnl1Q52KE7 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ccnl1Q52KE7 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC18.67■□□□□ 0.58
Ccnl1Q52KE7 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccnl1Q52KE7 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccnl1Q52KE7 Gm43195-201ENSMUST00000200614 2332 ntBASIC18.67■□□□□ 0.58
Ccnl1Q52KE7 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccnl1Q52KE7 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccnl1Q52KE7 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccnl1Q52KE7 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Ccnl1Q52KE7 AC163637.1-201ENSMUST00000215491 1894 ntBASIC18.67■□□□□ 0.58
Ccnl1Q52KE7 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccnl1Q52KE7 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccnl1Q52KE7 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ccnl1Q52KE7 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccnl1Q52KE7 Gm8749-201ENSMUST00000117737 331 ntBASIC18.66■□□□□ 0.58
Ccnl1Q52KE7 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccnl1Q52KE7 Gm7820-201ENSMUST00000121012 1052 ntBASIC18.66■□□□□ 0.58
Ccnl1Q52KE7 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ccnl1Q52KE7 Gm31326-201ENSMUST00000191856 1048 ntBASIC18.66■□□□□ 0.58
Ccnl1Q52KE7 Gm37748-201ENSMUST00000194379 1140 ntBASIC18.66■□□□□ 0.58
Ccnl1Q52KE7 Gm37230-201ENSMUST00000194491 818 ntBASIC18.66■□□□□ 0.58
Ccnl1Q52KE7 Gm18624-201ENSMUST00000220966 658 ntBASIC18.66■□□□□ 0.58
Ccnl1Q52KE7 AC125350.2-201ENSMUST00000224737 727 ntBASIC18.66■□□□□ 0.58
Ccnl1Q52KE7 AC156016.3-201ENSMUST00000228623 344 ntBASIC18.66■□□□□ 0.58
Ccnl1Q52KE7 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccnl1Q52KE7 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccnl1Q52KE7 Mir125a-201ENSMUST00000083545 68 ntBASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms