Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp39Q3TIX9 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp39Q3TIX9 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp39Q3TIX9 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp39Q3TIX9 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp39Q3TIX9 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp39Q3TIX9 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.43□□□□□ -0.1
Usp39Q3TIX9 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp39Q3TIX9 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Usp39Q3TIX9 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp39Q3TIX9 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Usp39Q3TIX9 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp39Q3TIX9 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp39Q3TIX9 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Usp39Q3TIX9 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Usp39Q3TIX9 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Usp39Q3TIX9 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp39Q3TIX9 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp39Q3TIX9 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Usp39Q3TIX9 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp39Q3TIX9 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
Usp39Q3TIX9 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp39Q3TIX9 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Usp39Q3TIX9 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp39Q3TIX9 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
Usp39Q3TIX9 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp39Q3TIX9 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp39Q3TIX9 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC14.42□□□□□ -0.1
Usp39Q3TIX9 Gm4535-201ENSMUST00000182274 558 ntBASIC14.42□□□□□ -0.1
Usp39Q3TIX9 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp39Q3TIX9 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.42□□□□□ -0.1
Usp39Q3TIX9 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp39Q3TIX9 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp39Q3TIX9 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp39Q3TIX9 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp39Q3TIX9 Gm10355-201ENSMUST00000097146 517 ntBASIC14.42□□□□□ -0.1
Usp39Q3TIX9 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp39Q3TIX9 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp39Q3TIX9 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Usp39Q3TIX9 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp39Q3TIX9 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp39Q3TIX9 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp39Q3TIX9 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp39Q3TIX9 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp39Q3TIX9 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp39Q3TIX9 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Usp39Q3TIX9 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Usp39Q3TIX9 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp39Q3TIX9 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp39Q3TIX9 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp39Q3TIX9 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.41□□□□□ -0.1
Usp39Q3TIX9 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
Usp39Q3TIX9 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp39Q3TIX9 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp39Q3TIX9 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp39Q3TIX9 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp39Q3TIX9 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp39Q3TIX9 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp39Q3TIX9 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp39Q3TIX9 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp39Q3TIX9 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Usp39Q3TIX9 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14.41□□□□□ -0.1
Usp39Q3TIX9 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.41□□□□□ -0.1
Usp39Q3TIX9 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC14.41□□□□□ -0.1
Usp39Q3TIX9 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC14.41□□□□□ -0.1
Usp39Q3TIX9 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Usp39Q3TIX9 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp39Q3TIX9 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Usp39Q3TIX9 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp39Q3TIX9 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp39Q3TIX9 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp39Q3TIX9 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp39Q3TIX9 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp39Q3TIX9 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Usp39Q3TIX9 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp39Q3TIX9 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.41□□□□□ -0.1
Usp39Q3TIX9 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp39Q3TIX9 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp39Q3TIX9 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp39Q3TIX9 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp39Q3TIX9 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.41□□□□□ -0.1
Usp39Q3TIX9 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp39Q3TIX9 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.41□□□□□ -0.1
Usp39Q3TIX9 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp39Q3TIX9 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp39Q3TIX9 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp39Q3TIX9 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp39Q3TIX9 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Usp39Q3TIX9 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp39Q3TIX9 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp39Q3TIX9 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp39Q3TIX9 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Usp39Q3TIX9 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp39Q3TIX9 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp39Q3TIX9 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp39Q3TIX9 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp39Q3TIX9 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Usp39Q3TIX9 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.4□□□□□ -0.1
Usp39Q3TIX9 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp39Q3TIX9 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms