Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
Chd8Q09XV5 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chd8Q09XV5 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Chd8Q09XV5 Gm10339-203ENSMUST00000225409 1671 ntBASIC13.2□□□□□ -0.3
Chd8Q09XV5 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC13.2□□□□□ -0.3
Chd8Q09XV5 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chd8Q09XV5 Gm5620-201ENSMUST00000077991 1348 ntBASIC13.2□□□□□ -0.3
Chd8Q09XV5 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chd8Q09XV5 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Chd8Q09XV5 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chd8Q09XV5 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chd8Q09XV5 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC13.2□□□□□ -0.3
Chd8Q09XV5 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Chd8Q09XV5 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC13.2□□□□□ -0.3
Chd8Q09XV5 Gm8227-201ENSMUST00000223306 571 ntBASIC13.2□□□□□ -0.3
Chd8Q09XV5 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chd8Q09XV5 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chd8Q09XV5 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chd8Q09XV5 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chd8Q09XV5 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chd8Q09XV5 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chd8Q09XV5 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chd8Q09XV5 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chd8Q09XV5 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chd8Q09XV5 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chd8Q09XV5 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chd8Q09XV5 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.19□□□□□ -0.3
Chd8Q09XV5 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chd8Q09XV5 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Chd8Q09XV5 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chd8Q09XV5 Gm24255-201ENSMUST00000104481 128 ntBASIC13.19□□□□□ -0.3
Chd8Q09XV5 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC13.19□□□□□ -0.3
Chd8Q09XV5 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chd8Q09XV5 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC13.19□□□□□ -0.3
Chd8Q09XV5 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chd8Q09XV5 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chd8Q09XV5 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chd8Q09XV5 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Chd8Q09XV5 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Chd8Q09XV5 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chd8Q09XV5 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chd8Q09XV5 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC13.19□□□□□ -0.3
Chd8Q09XV5 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chd8Q09XV5 Gm5850-201ENSMUST00000192923 1206 ntBASIC13.19□□□□□ -0.3
Chd8Q09XV5 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC13.19□□□□□ -0.3
Chd8Q09XV5 AC154462.2-201ENSMUST00000227519 370 ntBASIC13.19□□□□□ -0.3
Chd8Q09XV5 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chd8Q09XV5 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chd8Q09XV5 Mir125a-201ENSMUST00000083545 68 ntBASIC13.19□□□□□ -0.3
Chd8Q09XV5 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Chd8Q09XV5 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chd8Q09XV5 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chd8Q09XV5 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chd8Q09XV5 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chd8Q09XV5 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Chd8Q09XV5 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chd8Q09XV5 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chd8Q09XV5 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC13.18□□□□□ -0.3
Chd8Q09XV5 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chd8Q09XV5 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chd8Q09XV5 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chd8Q09XV5 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chd8Q09XV5 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Chd8Q09XV5 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Chd8Q09XV5 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC13.18□□□□□ -0.3
Chd8Q09XV5 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Chd8Q09XV5 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chd8Q09XV5 Gm2606-201ENSMUST00000100754 1002 ntBASIC13.18□□□□□ -0.3
Chd8Q09XV5 Gm12537-201ENSMUST00000119266 1002 ntBASIC13.18□□□□□ -0.3
Chd8Q09XV5 Gm12070-201ENSMUST00000119551 1002 ntBASIC13.18□□□□□ -0.3
Chd8Q09XV5 Gm12671-201ENSMUST00000119978 1002 ntBASIC13.18□□□□□ -0.3
Chd8Q09XV5 Gm13292-201ENSMUST00000120014 1000 ntBASIC13.18□□□□□ -0.3
Chd8Q09XV5 Gm13786-201ENSMUST00000122371 333 ntBASIC13.18□□□□□ -0.3
Chd8Q09XV5 Gm15429-201ENSMUST00000151268 798 ntBASIC13.18□□□□□ -0.3
Chd8Q09XV5 Gm20426-201ENSMUST00000173657 440 ntBASIC13.18□□□□□ -0.3
Chd8Q09XV5 Gm10359-201ENSMUST00000180167 1002 ntBASIC13.18□□□□□ -0.3
Chd8Q09XV5 Gm12033-201ENSMUST00000180654 1002 ntBASIC13.18□□□□□ -0.3
Chd8Q09XV5 Gm5559-201ENSMUST00000180755 1002 ntBASIC13.18□□□□□ -0.3
Chd8Q09XV5 Gm37008-201ENSMUST00000195712 319 ntBASIC13.18□□□□□ -0.3
Chd8Q09XV5 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chd8Q09XV5 Gm7293-201ENSMUST00000216682 1007 ntBASIC13.18□□□□□ -0.3
Chd8Q09XV5 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chd8Q09XV5 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC13.18□□□□□ -0.3
Chd8Q09XV5 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chd8Q09XV5 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chd8Q09XV5 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chd8Q09XV5 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chd8Q09XV5 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chd8Q09XV5 Gm26917-202ENSMUST00000192833 3329 ntBASIC13.18□□□□□ -0.3
Chd8Q09XV5 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chd8Q09XV5 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chd8Q09XV5 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Chd8Q09XV5 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chd8Q09XV5 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Chd8Q09XV5 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chd8Q09XV5 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chd8Q09XV5 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Chd8Q09XV5 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chd8Q09XV5 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC13.18□□□□□ -0.3
Chd8Q09XV5 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms