Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Gm21794-201ENSMUST00000187056 696 ntBASIC14.25□□□□□ -0.13
Hoxc4Q08624 Gm21880-201ENSMUST00000187275 696 ntBASIC14.25□□□□□ -0.13
Hoxc4Q08624 Gm21826-201ENSMUST00000187451 696 ntBASIC14.25□□□□□ -0.13
Hoxc4Q08624 Gm21198-201ENSMUST00000188393 696 ntBASIC14.25□□□□□ -0.13
Hoxc4Q08624 Gm21749-201ENSMUST00000189343 696 ntBASIC14.25□□□□□ -0.13
Hoxc4Q08624 Gm21901-201ENSMUST00000189568 696 ntBASIC14.25□□□□□ -0.13
Hoxc4Q08624 Gm29424-201ENSMUST00000189716 696 ntBASIC14.25□□□□□ -0.13
Hoxc4Q08624 Gm28599-201ENSMUST00000189838 694 ntBASIC14.25□□□□□ -0.13
Hoxc4Q08624 Gm21867-201ENSMUST00000189917 696 ntBASIC14.25□□□□□ -0.13
Hoxc4Q08624 Gm29269-201ENSMUST00000190087 696 ntBASIC14.25□□□□□ -0.13
Hoxc4Q08624 Gm21722-201ENSMUST00000190153 696 ntBASIC14.25□□□□□ -0.13
Hoxc4Q08624 Gm28423-201ENSMUST00000190701 696 ntBASIC14.25□□□□□ -0.13
Hoxc4Q08624 Gm21899-201ENSMUST00000190745 696 ntBASIC14.25□□□□□ -0.13
Hoxc4Q08624 Gm21910-201ENSMUST00000191163 696 ntBASIC14.25□□□□□ -0.13
Hoxc4Q08624 Gm21849-201ENSMUST00000191571 696 ntBASIC14.25□□□□□ -0.13
Hoxc4Q08624 Gm28678-201ENSMUST00000191593 696 ntBASIC14.25□□□□□ -0.13
Hoxc4Q08624 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxc4Q08624 Gm20910-201ENSMUST00000193268 696 ntBASIC14.25□□□□□ -0.13
Hoxc4Q08624 Gm21871-201ENSMUST00000194621 696 ntBASIC14.25□□□□□ -0.13
Hoxc4Q08624 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC14.25□□□□□ -0.13
Hoxc4Q08624 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Hoxc4Q08624 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxc4Q08624 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
Hoxc4Q08624 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Hoxc4Q08624 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxc4Q08624 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxc4Q08624 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxc4Q08624 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxc4Q08624 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxc4Q08624 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Hoxc4Q08624 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxc4Q08624 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Hoxc4Q08624 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Hoxc4Q08624 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxc4Q08624 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxc4Q08624 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxc4Q08624 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxc4Q08624 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxc4Q08624 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxc4Q08624 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxc4Q08624 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxc4Q08624 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxc4Q08624 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC14.24□□□□□ -0.13
Hoxc4Q08624 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxc4Q08624 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxc4Q08624 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Hoxc4Q08624 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxc4Q08624 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxc4Q08624 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Hoxc4Q08624 Gm27533-201ENSMUST00000183800 152 ntBASIC14.24□□□□□ -0.13
Hoxc4Q08624 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC14.24□□□□□ -0.13
Hoxc4Q08624 Gm17837-201ENSMUST00000186435 985 ntBASIC14.24□□□□□ -0.13
Hoxc4Q08624 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxc4Q08624 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC14.24□□□□□ -0.13
Hoxc4Q08624 Rbfox2-208ENSMUST00000227930 1218 ntBASIC14.24□□□□□ -0.13
Hoxc4Q08624 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.24□□□□□ -0.13
Hoxc4Q08624 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxc4Q08624 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxc4Q08624 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxc4Q08624 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Hoxc4Q08624 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxc4Q08624 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxc4Q08624 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxc4Q08624 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxc4Q08624 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxc4Q08624 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxc4Q08624 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxc4Q08624 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxc4Q08624 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Hoxc4Q08624 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxc4Q08624 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxc4Q08624 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxc4Q08624 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxc4Q08624 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxc4Q08624 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxc4Q08624 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxc4Q08624 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxc4Q08624 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxc4Q08624 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.23□□□□□ -0.13
Hoxc4Q08624 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxc4Q08624 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxc4Q08624 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14.23□□□□□ -0.13
Hoxc4Q08624 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxc4Q08624 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxc4Q08624 Gm14767-201ENSMUST00000121559 586 ntBASIC14.23□□□□□ -0.13
Hoxc4Q08624 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxc4Q08624 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxc4Q08624 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Hoxc4Q08624 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Hoxc4Q08624 Gm27680-201ENSMUST00000184192 160 ntBASIC14.23□□□□□ -0.13
Hoxc4Q08624 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Hoxc4Q08624 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxc4Q08624 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxc4Q08624 Gm6888-201ENSMUST00000221983 706 ntBASIC14.23□□□□□ -0.13
Hoxc4Q08624 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxc4Q08624 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxc4Q08624 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxc4Q08624 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxc4Q08624 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxc4Q08624 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms