Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Hspg2Q05793 Gm9002-201ENSMUST00000178437 499 ntBASIC10.8□□□□□ -0.68
Hspg2Q05793 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hspg2Q05793 Gm27701-201ENSMUST00000184498 110 ntBASIC10.8□□□□□ -0.68
Hspg2Q05793 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hspg2Q05793 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hspg2Q05793 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC10.79□□□□□ -0.68
Hspg2Q05793 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hspg2Q05793 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hspg2Q05793 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hspg2Q05793 Gm14780-201ENSMUST00000118387 2737 ntBASIC10.79□□□□□ -0.68
Hspg2Q05793 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hspg2Q05793 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Hspg2Q05793 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Hspg2Q05793 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC10.79□□□□□ -0.68
Hspg2Q05793 Gm37230-201ENSMUST00000194491 818 ntBASIC10.79□□□□□ -0.68
Hspg2Q05793 Gm18056-201ENSMUST00000207670 568 ntBASIC10.79□□□□□ -0.68
Hspg2Q05793 Gm18061-201ENSMUST00000208350 562 ntBASIC10.79□□□□□ -0.68
Hspg2Q05793 Gm18063-201ENSMUST00000208529 568 ntBASIC10.79□□□□□ -0.68
Hspg2Q05793 Gm18052-201ENSMUST00000208750 559 ntBASIC10.79□□□□□ -0.68
Hspg2Q05793 Gm7390-201ENSMUST00000212452 1216 ntBASIC10.79□□□□□ -0.68
Hspg2Q05793 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hspg2Q05793 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hspg2Q05793 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hspg2Q05793 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Hspg2Q05793 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hspg2Q05793 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Hspg2Q05793 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hspg2Q05793 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC10.79□□□□□ -0.68
Hspg2Q05793 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hspg2Q05793 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hspg2Q05793 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Hspg2Q05793 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Hspg2Q05793 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hspg2Q05793 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hspg2Q05793 Mir692-1-201ENSMUST00000102263 109 ntBASIC10.79□□□□□ -0.68
Hspg2Q05793 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC10.79□□□□□ -0.68
Hspg2Q05793 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hspg2Q05793 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC10.79□□□□□ -0.68
Hspg2Q05793 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC10.79□□□□□ -0.68
Hspg2Q05793 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC10.79□□□□□ -0.68
Hspg2Q05793 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC10.79□□□□□ -0.68
Hspg2Q05793 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC10.79□□□□□ -0.68
Hspg2Q05793 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
Hspg2Q05793 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hspg2Q05793 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Hspg2Q05793 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
Hspg2Q05793 Gm46209-201ENSMUST00000217912 553 ntBASIC10.79□□□□□ -0.68
Hspg2Q05793 AC159747.1-201ENSMUST00000219903 265 ntBASIC10.79□□□□□ -0.68
Hspg2Q05793 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hspg2Q05793 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hspg2Q05793 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hspg2Q05793 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Hspg2Q05793 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Hspg2Q05793 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Hspg2Q05793 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hspg2Q05793 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Hspg2Q05793 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hspg2Q05793 Gm14452-201ENSMUST00000118680 1632 ntBASIC10.78□□□□□ -0.68
Hspg2Q05793 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Hspg2Q05793 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hspg2Q05793 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hspg2Q05793 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hspg2Q05793 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Hspg2Q05793 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Hspg2Q05793 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hspg2Q05793 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC10.78□□□□□ -0.68
Hspg2Q05793 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hspg2Q05793 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC10.78□□□□□ -0.68
Hspg2Q05793 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Hspg2Q05793 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hspg2Q05793 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hspg2Q05793 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Hspg2Q05793 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hspg2Q05793 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Hspg2Q05793 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hspg2Q05793 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hspg2Q05793 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hspg2Q05793 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Hspg2Q05793 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC10.78□□□□□ -0.68
Hspg2Q05793 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Hspg2Q05793 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
Hspg2Q05793 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hspg2Q05793 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hspg2Q05793 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hspg2Q05793 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC10.78□□□□□ -0.68
Hspg2Q05793 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hspg2Q05793 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hspg2Q05793 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hspg2Q05793 Gm45751-201ENSMUST00000210185 1573 ntBASIC10.78□□□□□ -0.68
Hspg2Q05793 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Hspg2Q05793 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC10.78□□□□□ -0.68
Hspg2Q05793 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hspg2Q05793 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Hspg2Q05793 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Hspg2Q05793 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Hspg2Q05793 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC10.77□□□□□ -0.68
Hspg2Q05793 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Hspg2Q05793 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
Hspg2Q05793 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms