Protein–RNA interactions for Protein: P97789

Xrn1, 5'-3' exoribonuclease 1, mousemouse

Known RBP Predictions only

Length 1,719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrn1P97789 Gm9200-201ENSMUST00000118513 1354 ntBASIC20.85■□□□□ 0.93
Xrn1P97789 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Xrn1P97789 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
Xrn1P97789 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC20.84■□□□□ 0.93
Xrn1P97789 Gm24196-201ENSMUST00000179161 110 ntBASIC20.84■□□□□ 0.93
Xrn1P97789 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC20.84■□□□□ 0.93
Xrn1P97789 Rassf8-202ENSMUST00000058538 1131 ntBASIC20.84■□□□□ 0.93
Xrn1P97789 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Xrn1P97789 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Xrn1P97789 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Xrn1P97789 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Xrn1P97789 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Xrn1P97789 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC20.84■□□□□ 0.93
Xrn1P97789 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Xrn1P97789 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Xrn1P97789 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Xrn1P97789 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Xrn1P97789 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Xrn1P97789 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Xrn1P97789 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Xrn1P97789 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC20.84■□□□□ 0.93
Xrn1P97789 Gm21470-201ENSMUST00000187680 696 ntBASIC20.84■□□□□ 0.93
Xrn1P97789 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Xrn1P97789 Gm8598-201ENSMUST00000221184 836 ntBASIC20.84■□□□□ 0.93
Xrn1P97789 AC122459.1-201ENSMUST00000228373 885 ntBASIC20.84■□□□□ 0.93
Xrn1P97789 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Xrn1P97789 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC20.83■□□□□ 0.93
Xrn1P97789 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC20.83■□□□□ 0.93
Xrn1P97789 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
Xrn1P97789 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Xrn1P97789 AC114008.2-201ENSMUST00000227699 1347 ntBASIC20.83■□□□□ 0.93
Xrn1P97789 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Xrn1P97789 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Xrn1P97789 Gm15957-201ENSMUST00000118893 974 ntBASIC20.83■□□□□ 0.92
Xrn1P97789 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC20.83■□□□□ 0.92
Xrn1P97789 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Xrn1P97789 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Xrn1P97789 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Xrn1P97789 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
Xrn1P97789 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Xrn1P97789 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Xrn1P97789 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Xrn1P97789 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Xrn1P97789 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Xrn1P97789 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Xrn1P97789 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC20.82■□□□□ 0.92
Xrn1P97789 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Xrn1P97789 Gm11524-201ENSMUST00000119349 807 ntBASIC20.82■□□□□ 0.92
Xrn1P97789 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Xrn1P97789 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Xrn1P97789 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC20.82■□□□□ 0.92
Xrn1P97789 AC102291.3-201ENSMUST00000226566 405 ntBASIC20.82■□□□□ 0.92
Xrn1P97789 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Xrn1P97789 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Xrn1P97789 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Xrn1P97789 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC20.82■□□□□ 0.92
Xrn1P97789 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Xrn1P97789 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Xrn1P97789 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Xrn1P97789 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Xrn1P97789 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Xrn1P97789 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC20.81■□□□□ 0.92
Xrn1P97789 Gm12882-201ENSMUST00000121696 517 ntBASIC20.81■□□□□ 0.92
Xrn1P97789 Gm19078-201ENSMUST00000206311 727 ntBASIC20.81■□□□□ 0.92
Xrn1P97789 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Xrn1P97789 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Xrn1P97789 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Xrn1P97789 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Xrn1P97789 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Xrn1P97789 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Xrn1P97789 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC20.81■□□□□ 0.92
Xrn1P97789 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Xrn1P97789 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Xrn1P97789 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Xrn1P97789 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Xrn1P97789 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Xrn1P97789 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC20.81■□□□□ 0.92
Xrn1P97789 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC20.81■□□□□ 0.92
Xrn1P97789 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Xrn1P97789 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Xrn1P97789 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Xrn1P97789 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Xrn1P97789 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC20.81■□□□□ 0.92
Xrn1P97789 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC20.81■□□□□ 0.92
Xrn1P97789 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Xrn1P97789 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Xrn1P97789 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Xrn1P97789 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Xrn1P97789 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Xrn1P97789 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Xrn1P97789 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Xrn1P97789 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC20.8■□□□□ 0.92
Xrn1P97789 AC125117.1-201ENSMUST00000228121 468 ntBASIC20.8■□□□□ 0.92
Xrn1P97789 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Xrn1P97789 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Xrn1P97789 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Xrn1P97789 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Xrn1P97789 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Xrn1P97789 Prob1-201ENSMUST00000097619 3021 ntBASIC20.79■□□□□ 0.92
Xrn1P97789 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms