Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
PrkdcP97313 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC9.97□□□□□ -0.81
PrkdcP97313 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
PrkdcP97313 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
PrkdcP97313 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
PrkdcP97313 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
PrkdcP97313 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
PrkdcP97313 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
PrkdcP97313 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
PrkdcP97313 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
PrkdcP97313 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC9.96□□□□□ -0.81
PrkdcP97313 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
PrkdcP97313 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC9.96□□□□□ -0.81
PrkdcP97313 AU022133-201ENSMUST00000200601 873 ntBASIC9.96□□□□□ -0.81
PrkdcP97313 AC192088.1-201ENSMUST00000227561 301 ntBASIC9.96□□□□□ -0.81
PrkdcP97313 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
PrkdcP97313 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
PrkdcP97313 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC9.96□□□□□ -0.81
PrkdcP97313 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
PrkdcP97313 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
PrkdcP97313 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
PrkdcP97313 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
PrkdcP97313 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
PrkdcP97313 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
PrkdcP97313 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
PrkdcP97313 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC9.96□□□□□ -0.82
PrkdcP97313 Gm2639-201ENSMUST00000156881 1297 ntBASIC9.96□□□□□ -0.82
PrkdcP97313 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC9.96□□□□□ -0.82
PrkdcP97313 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
PrkdcP97313 Gm29705-201ENSMUST00000212598 474 ntBASIC9.96□□□□□ -0.82
PrkdcP97313 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
PrkdcP97313 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
PrkdcP97313 AC154806.6-201ENSMUST00000228192 202 ntBASIC9.96□□□□□ -0.82
PrkdcP97313 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
PrkdcP97313 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
PrkdcP97313 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
PrkdcP97313 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
PrkdcP97313 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
PrkdcP97313 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
PrkdcP97313 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
PrkdcP97313 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
PrkdcP97313 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
PrkdcP97313 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
PrkdcP97313 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
PrkdcP97313 Gm11803-201ENSMUST00000119966 444 ntBASIC9.96□□□□□ -0.82
PrkdcP97313 Gm6334-201ENSMUST00000207083 228 ntBASIC9.96□□□□□ -0.82
PrkdcP97313 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
PrkdcP97313 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
PrkdcP97313 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC9.95□□□□□ -0.82
PrkdcP97313 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC9.95□□□□□ -0.82
PrkdcP97313 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC9.95□□□□□ -0.82
PrkdcP97313 Gm8227-201ENSMUST00000223306 571 ntBASIC9.95□□□□□ -0.82
PrkdcP97313 AC154595.3-201ENSMUST00000224579 384 ntBASIC9.95□□□□□ -0.82
PrkdcP97313 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
PrkdcP97313 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
PrkdcP97313 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC9.95□□□□□ -0.82
PrkdcP97313 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
PrkdcP97313 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
PrkdcP97313 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC9.95□□□□□ -0.82
PrkdcP97313 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
PrkdcP97313 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
PrkdcP97313 Dancr-204ENSMUST00000132389 2347 ntBASIC9.95□□□□□ -0.82
PrkdcP97313 Gm13689-201ENSMUST00000119360 685 ntBASIC9.95□□□□□ -0.82
PrkdcP97313 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC9.95□□□□□ -0.82
PrkdcP97313 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC9.95□□□□□ -0.82
PrkdcP97313 AC140406.1-201ENSMUST00000226481 465 ntBASIC9.95□□□□□ -0.82
PrkdcP97313 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
PrkdcP97313 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
PrkdcP97313 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
PrkdcP97313 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
PrkdcP97313 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
PrkdcP97313 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
PrkdcP97313 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
PrkdcP97313 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
PrkdcP97313 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
PrkdcP97313 Gm13464-201ENSMUST00000119418 935 ntBASIC9.95□□□□□ -0.82
PrkdcP97313 Gm4819-201ENSMUST00000182170 1009 ntBASIC9.95□□□□□ -0.82
PrkdcP97313 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
PrkdcP97313 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
PrkdcP97313 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
PrkdcP97313 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
PrkdcP97313 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
PrkdcP97313 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
PrkdcP97313 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
PrkdcP97313 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
PrkdcP97313 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC9.94□□□□□ -0.82
PrkdcP97313 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC9.94□□□□□ -0.82
PrkdcP97313 AC153872.1-201ENSMUST00000199539 128 ntBASIC9.94□□□□□ -0.82
PrkdcP97313 Gm7118-201ENSMUST00000200167 1003 ntBASIC9.94□□□□□ -0.82
PrkdcP97313 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC9.94□□□□□ -0.82
PrkdcP97313 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
PrkdcP97313 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
PrkdcP97313 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
PrkdcP97313 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
PrkdcP97313 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
PrkdcP97313 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC9.94□□□□□ -0.82
PrkdcP97313 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
PrkdcP97313 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
PrkdcP97313 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
PrkdcP97313 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC9.94□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms