Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ybx1P62960 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ybx1P62960 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ybx1P62960 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ybx1P62960 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ybx1P62960 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ybx1P62960 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ybx1P62960 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC15.22■□□□□ 0.03
Ybx1P62960 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ybx1P62960 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Ybx1P62960 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ybx1P62960 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC15.22■□□□□ 0.03
Ybx1P62960 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC15.22■□□□□ 0.03
Ybx1P62960 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ybx1P62960 Gm25144-201ENSMUST00000179561 110 ntBASIC15.22■□□□□ 0.03
Ybx1P62960 Gm25352-201ENSMUST00000179815 110 ntBASIC15.22■□□□□ 0.03
Ybx1P62960 Gtpbp10-211ENSMUST00000198799 648 ntBASIC15.22■□□□□ 0.03
Ybx1P62960 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Ybx1P62960 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ybx1P62960 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ybx1P62960 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ybx1P62960 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ybx1P62960 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ybx1P62960 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ybx1P62960 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ybx1P62960 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ybx1P62960 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC15.22■□□□□ 0.03
Ybx1P62960 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ybx1P62960 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ybx1P62960 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC15.22■□□□□ 0.03
Ybx1P62960 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ybx1P62960 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ybx1P62960 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ybx1P62960 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ybx1P62960 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ybx1P62960 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Ybx1P62960 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Ybx1P62960 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ybx1P62960 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ybx1P62960 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Ybx1P62960 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ybx1P62960 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ybx1P62960 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ybx1P62960 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ybx1P62960 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Ybx1P62960 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC15.21■□□□□ 0.03
Ybx1P62960 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ybx1P62960 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC15.21■□□□□ 0.03
Ybx1P62960 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ybx1P62960 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC15.21■□□□□ 0.03
Ybx1P62960 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC15.21■□□□□ 0.03
Ybx1P62960 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC15.21■□□□□ 0.03
Ybx1P62960 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ybx1P62960 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ybx1P62960 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ybx1P62960 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ybx1P62960 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ybx1P62960 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC15.2■□□□□ 0.02
Ybx1P62960 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ybx1P62960 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ybx1P62960 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Ybx1P62960 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ybx1P62960 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ybx1P62960 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ybx1P62960 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ybx1P62960 AC124751.1-201ENSMUST00000222716 1408 ntBASIC15.2■□□□□ 0.02
Ybx1P62960 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ybx1P62960 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
Ybx1P62960 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ybx1P62960 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC15.2■□□□□ 0.02
Ybx1P62960 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC15.2■□□□□ 0.02
Ybx1P62960 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC15.2■□□□□ 0.02
Ybx1P62960 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC15.2■□□□□ 0.02
Ybx1P62960 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ybx1P62960 Gm27533-201ENSMUST00000183800 152 ntBASIC15.2■□□□□ 0.02
Ybx1P62960 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Ybx1P62960 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ybx1P62960 Gm7775-201ENSMUST00000218871 853 ntBASIC15.2■□□□□ 0.02
Ybx1P62960 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ybx1P62960 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Ybx1P62960 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Ybx1P62960 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ybx1P62960 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ybx1P62960 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ybx1P62960 Gm27528-202ENSMUST00000222916 2012 ntBASIC15.2■□□□□ 0.02
Ybx1P62960 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ybx1P62960 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ybx1P62960 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ybx1P62960 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Ybx1P62960 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ybx1P62960 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ybx1P62960 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ybx1P62960 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Ybx1P62960 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ybx1P62960 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ybx1P62960 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ybx1P62960 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC15.19■□□□□ 0.02
Ybx1P62960 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ybx1P62960 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC15.19■□□□□ 0.02
Ybx1P62960 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms