Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lim2P56563 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lim2P56563 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lim2P56563 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Lim2P56563 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Lim2P56563 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Lim2P56563 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Lim2P56563 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Lim2P56563 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lim2P56563 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.88□□□□□ -0.03
Lim2P56563 Gm12892-201ENSMUST00000117367 1146 ntBASIC14.88□□□□□ -0.03
Lim2P56563 Gm16198-201ENSMUST00000118766 670 ntBASIC14.88□□□□□ -0.03
Lim2P56563 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.88□□□□□ -0.03
Lim2P56563 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lim2P56563 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lim2P56563 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Lim2P56563 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lim2P56563 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Lim2P56563 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lim2P56563 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lim2P56563 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lim2P56563 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Lim2P56563 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lim2P56563 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Lim2P56563 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Lim2P56563 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lim2P56563 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lim2P56563 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Lim2P56563 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lim2P56563 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lim2P56563 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Lim2P56563 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lim2P56563 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Lim2P56563 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lim2P56563 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Lim2P56563 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Lim2P56563 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.87□□□□□ -0.03
Lim2P56563 Ndufaf2-202ENSMUST00000223734 556 ntBASIC14.87□□□□□ -0.03
Lim2P56563 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lim2P56563 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lim2P56563 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Lim2P56563 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.87□□□□□ -0.03
Lim2P56563 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Lim2P56563 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lim2P56563 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC14.87□□□□□ -0.03
Lim2P56563 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lim2P56563 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lim2P56563 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Lim2P56563 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lim2P56563 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Lim2P56563 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Lim2P56563 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lim2P56563 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.86□□□□□ -0.03
Lim2P56563 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Lim2P56563 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lim2P56563 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.86□□□□□ -0.03
Lim2P56563 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lim2P56563 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.86□□□□□ -0.03
Lim2P56563 Gm24513-201ENSMUST00000174964 138 ntBASIC14.86□□□□□ -0.03
Lim2P56563 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Lim2P56563 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Lim2P56563 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lim2P56563 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lim2P56563 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.86□□□□□ -0.03
Lim2P56563 Gm10154-201ENSMUST00000084445 354 ntBASIC14.86□□□□□ -0.03
Lim2P56563 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lim2P56563 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lim2P56563 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lim2P56563 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lim2P56563 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lim2P56563 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lim2P56563 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lim2P56563 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Lim2P56563 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lim2P56563 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lim2P56563 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lim2P56563 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lim2P56563 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lim2P56563 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Lim2P56563 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lim2P56563 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.86□□□□□ -0.03
Lim2P56563 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Lim2P56563 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Lim2P56563 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Lim2P56563 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lim2P56563 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.85□□□□□ -0.03
Lim2P56563 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.85□□□□□ -0.03
Lim2P56563 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lim2P56563 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.85□□□□□ -0.03
Lim2P56563 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lim2P56563 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lim2P56563 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lim2P56563 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lim2P56563 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lim2P56563 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Lim2P56563 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC14.85□□□□□ -0.03
Lim2P56563 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lim2P56563 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lim2P56563 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lim2P56563 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms