Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
Cux1P53564 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Cux1P53564 Gm12585-201ENSMUST00000117307 290 ntBASIC22.58■■□□□ 1.21
Cux1P53564 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC22.58■■□□□ 1.21
Cux1P53564 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC22.58■■□□□ 1.21
Cux1P53564 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Cux1P53564 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
Cux1P53564 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC22.58■■□□□ 1.21
Cux1P53564 AC165157.4-201ENSMUST00000220587 139 ntBASIC22.58■■□□□ 1.21
Cux1P53564 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Cux1P53564 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Cux1P53564 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC22.58■■□□□ 1.21
Cux1P53564 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Cux1P53564 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Cux1P53564 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Cux1P53564 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.2
Cux1P53564 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.2
Cux1P53564 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
Cux1P53564 AC133083.1-201ENSMUST00000221736 2209 ntBASIC22.57■■□□□ 1.2
Cux1P53564 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Cux1P53564 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC22.57■■□□□ 1.2
Cux1P53564 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
Cux1P53564 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC22.57■■□□□ 1.2
Cux1P53564 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC22.57■■□□□ 1.2
Cux1P53564 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Cux1P53564 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC22.57■■□□□ 1.2
Cux1P53564 Gm7558-201ENSMUST00000193221 1165 ntBASIC22.57■■□□□ 1.2
Cux1P53564 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC22.57■■□□□ 1.2
Cux1P53564 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC22.57■■□□□ 1.2
Cux1P53564 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Cux1P53564 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
Cux1P53564 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Cux1P53564 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC22.57■■□□□ 1.2
Cux1P53564 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Cux1P53564 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Cux1P53564 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC22.57■■□□□ 1.2
Cux1P53564 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Cux1P53564 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Cux1P53564 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Cux1P53564 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Cux1P53564 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC22.57■■□□□ 1.2
Cux1P53564 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC22.57■■□□□ 1.2
Cux1P53564 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC22.57■■□□□ 1.2
Cux1P53564 Gm19220-201ENSMUST00000222682 803 ntBASIC22.57■■□□□ 1.2
Cux1P53564 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC22.57■■□□□ 1.2
Cux1P53564 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Cux1P53564 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Cux1P53564 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
Cux1P53564 Gm14452-201ENSMUST00000118680 1632 ntBASIC22.56■■□□□ 1.2
Cux1P53564 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Cux1P53564 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Cux1P53564 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Cux1P53564 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Cux1P53564 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Cux1P53564 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
Cux1P53564 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Cux1P53564 Gm17150-201ENSMUST00000165577 381 ntBASIC22.56■■□□□ 1.2
Cux1P53564 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Cux1P53564 Gm27701-201ENSMUST00000184498 110 ntBASIC22.56■■□□□ 1.2
Cux1P53564 AC125350.2-201ENSMUST00000224737 727 ntBASIC22.56■■□□□ 1.2
Cux1P53564 AC149294.4-201ENSMUST00000227870 882 ntBASIC22.56■■□□□ 1.2
Cux1P53564 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Cux1P53564 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
Cux1P53564 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
Cux1P53564 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Cux1P53564 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Cux1P53564 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
Cux1P53564 Gm42901-201ENSMUST00000197735 3171 ntBASIC22.55■■□□□ 1.2
Cux1P53564 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Cux1P53564 Gm13829-201ENSMUST00000119600 138 ntBASIC22.55■■□□□ 1.2
Cux1P53564 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Cux1P53564 Gm15393-201ENSMUST00000120499 219 ntBASIC22.55■■□□□ 1.2
Cux1P53564 Gm6266-201ENSMUST00000203844 806 ntBASIC22.55■■□□□ 1.2
Cux1P53564 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Cux1P53564 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Cux1P53564 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
Cux1P53564 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
Cux1P53564 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Cux1P53564 Gm9252-201ENSMUST00000172364 1602 ntBASIC22.55■■□□□ 1.2
Cux1P53564 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
Cux1P53564 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Cux1P53564 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Cux1P53564 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Cux1P53564 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Cux1P53564 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Cux1P53564 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Cux1P53564 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Cux1P53564 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Cux1P53564 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC22.54■■□□□ 1.2
Cux1P53564 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC22.54■■□□□ 1.2
Cux1P53564 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC22.54■■□□□ 1.2
Cux1P53564 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Cux1P53564 Gm5354-201ENSMUST00000182417 973 ntBASIC22.54■■□□□ 1.2
Cux1P53564 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC22.54■■□□□ 1.2
Cux1P53564 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Cux1P53564 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Cux1P53564 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Cux1P53564 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Cux1P53564 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Cux1P53564 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms