Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm21009-201ENSMUST00000197169 1669 ntBASIC15.73■□□□□ 0.11
Shmt1P50431 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Shmt1P50431 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Shmt1P50431 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Shmt1P50431 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Shmt1P50431 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Shmt1P50431 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Shmt1P50431 Gm14026-201ENSMUST00000120625 1789 ntBASIC15.72■□□□□ 0.11
Shmt1P50431 CT025626.1-201ENSMUST00000223735 1455 ntBASIC15.72■□□□□ 0.11
Shmt1P50431 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Shmt1P50431 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
Shmt1P50431 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Shmt1P50431 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Shmt1P50431 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Shmt1P50431 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Shmt1P50431 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Shmt1P50431 Gm13233-201ENSMUST00000118760 1443 ntBASIC15.72■□□□□ 0.11
Shmt1P50431 Gm13244-201ENSMUST00000118855 1446 ntBASIC15.72■□□□□ 0.11
Shmt1P50431 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Shmt1P50431 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Shmt1P50431 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Shmt1P50431 Auts2-212ENSMUST00000178555 309 ntBASIC15.72■□□□□ 0.11
Shmt1P50431 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC15.72■□□□□ 0.11
Shmt1P50431 Mir6990-201ENSMUST00000183724 91 ntBASIC15.72■□□□□ 0.11
Shmt1P50431 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC15.72■□□□□ 0.11
Shmt1P50431 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Shmt1P50431 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
Shmt1P50431 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Shmt1P50431 Gm8396-201ENSMUST00000057361 823 ntBASIC15.72■□□□□ 0.11
Shmt1P50431 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC15.72■□□□□ 0.11
Shmt1P50431 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC15.72■□□□□ 0.11
Shmt1P50431 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Shmt1P50431 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Shmt1P50431 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC15.72■□□□□ 0.11
Shmt1P50431 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.72■□□□□ 0.11
Shmt1P50431 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Shmt1P50431 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC15.71■□□□□ 0.11
Shmt1P50431 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Shmt1P50431 Gm10584-201ENSMUST00000207036 2628 ntBASIC15.71■□□□□ 0.11
Shmt1P50431 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Shmt1P50431 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC15.71■□□□□ 0.11
Shmt1P50431 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Shmt1P50431 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Shmt1P50431 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC15.71■□□□□ 0.11
Shmt1P50431 Gm12017-201ENSMUST00000122453 1003 ntBASIC15.71■□□□□ 0.11
Shmt1P50431 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Shmt1P50431 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Shmt1P50431 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Shmt1P50431 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Shmt1P50431 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Shmt1P50431 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.71■□□□□ 0.11
Shmt1P50431 AC164565.1-201ENSMUST00000217520 1484 ntBASIC15.71■□□□□ 0.1
Shmt1P50431 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Shmt1P50431 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Shmt1P50431 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
Shmt1P50431 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Shmt1P50431 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Shmt1P50431 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shmt1P50431 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Shmt1P50431 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.7■□□□□ 0.1
Shmt1P50431 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shmt1P50431 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shmt1P50431 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shmt1P50431 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC15.7■□□□□ 0.1
Shmt1P50431 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shmt1P50431 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shmt1P50431 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shmt1P50431 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shmt1P50431 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Shmt1P50431 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC15.7■□□□□ 0.1
Shmt1P50431 Gm15920-201ENSMUST00000118998 402 ntBASIC15.7■□□□□ 0.1
Shmt1P50431 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC15.7■□□□□ 0.1
Shmt1P50431 Gm43474-201ENSMUST00000196415 774 ntBASIC15.7■□□□□ 0.1
Shmt1P50431 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC15.7■□□□□ 0.1
Shmt1P50431 Klk2-ps-201ENSMUST00000205342 571 ntBASIC15.7■□□□□ 0.1
Shmt1P50431 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC15.7■□□□□ 0.1
Shmt1P50431 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC15.7■□□□□ 0.1
Shmt1P50431 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shmt1P50431 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC15.7■□□□□ 0.1
Shmt1P50431 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shmt1P50431 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Shmt1P50431 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shmt1P50431 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Shmt1P50431 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shmt1P50431 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shmt1P50431 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shmt1P50431 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shmt1P50431 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shmt1P50431 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shmt1P50431 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shmt1P50431 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shmt1P50431 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shmt1P50431 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shmt1P50431 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shmt1P50431 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shmt1P50431 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Shmt1P50431 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shmt1P50431 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shmt1P50431 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Shmt1P50431 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms