Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LdlrP35951 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
LdlrP35951 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
LdlrP35951 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LdlrP35951 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LdlrP35951 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LdlrP35951 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LdlrP35951 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
LdlrP35951 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.82□□□□□ -0.04
LdlrP35951 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LdlrP35951 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LdlrP35951 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LdlrP35951 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LdlrP35951 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
LdlrP35951 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.82□□□□□ -0.04
LdlrP35951 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.82□□□□□ -0.04
LdlrP35951 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14.82□□□□□ -0.04
LdlrP35951 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LdlrP35951 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LdlrP35951 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LdlrP35951 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LdlrP35951 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LdlrP35951 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
LdlrP35951 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.82□□□□□ -0.04
LdlrP35951 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LdlrP35951 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
LdlrP35951 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LdlrP35951 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.82□□□□□ -0.04
LdlrP35951 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LdlrP35951 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
LdlrP35951 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.82□□□□□ -0.04
LdlrP35951 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LdlrP35951 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
LdlrP35951 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
LdlrP35951 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
LdlrP35951 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
LdlrP35951 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LdlrP35951 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
LdlrP35951 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
LdlrP35951 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
LdlrP35951 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
LdlrP35951 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC14.81□□□□□ -0.04
LdlrP35951 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LdlrP35951 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC14.81□□□□□ -0.04
LdlrP35951 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LdlrP35951 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.81□□□□□ -0.04
LdlrP35951 AC154621.1-201ENSMUST00000226155 1119 ntBASIC14.81□□□□□ -0.04
LdlrP35951 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
LdlrP35951 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
LdlrP35951 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
LdlrP35951 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LdlrP35951 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.81□□□□□ -0.04
LdlrP35951 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
LdlrP35951 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LdlrP35951 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
LdlrP35951 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
LdlrP35951 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LdlrP35951 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.81□□□□□ -0.04
LdlrP35951 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
LdlrP35951 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
LdlrP35951 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
LdlrP35951 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LdlrP35951 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LdlrP35951 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LdlrP35951 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LdlrP35951 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
LdlrP35951 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LdlrP35951 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
LdlrP35951 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LdlrP35951 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
LdlrP35951 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
LdlrP35951 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LdlrP35951 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LdlrP35951 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LdlrP35951 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC14.8□□□□□ -0.04
LdlrP35951 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC14.8□□□□□ -0.04
LdlrP35951 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC14.8□□□□□ -0.04
LdlrP35951 Gm12008-201ENSMUST00000117791 755 ntBASIC14.8□□□□□ -0.04
LdlrP35951 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
LdlrP35951 Gm4535-201ENSMUST00000182274 558 ntBASIC14.8□□□□□ -0.04
LdlrP35951 Gm7506-201ENSMUST00000207758 815 ntBASIC14.8□□□□□ -0.04
LdlrP35951 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LdlrP35951 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.8□□□□□ -0.04
LdlrP35951 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC14.8□□□□□ -0.04
LdlrP35951 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
LdlrP35951 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LdlrP35951 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LdlrP35951 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LdlrP35951 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
LdlrP35951 Gm10355-201ENSMUST00000097146 517 ntBASIC14.8□□□□□ -0.04
LdlrP35951 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LdlrP35951 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LdlrP35951 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LdlrP35951 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LdlrP35951 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LdlrP35951 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.8□□□□□ -0.04
LdlrP35951 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LdlrP35951 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
LdlrP35951 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LdlrP35951 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms