Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Sftpa1P35242 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
Sftpa1P35242 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Sftpa1P35242 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Sftpa1P35242 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC13.71□□□□□ -0.22
Sftpa1P35242 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Sftpa1P35242 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Sftpa1P35242 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC13.71□□□□□ -0.22
Sftpa1P35242 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sftpa1P35242 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sftpa1P35242 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Sftpa1P35242 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sftpa1P35242 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sftpa1P35242 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sftpa1P35242 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sftpa1P35242 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Sftpa1P35242 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sftpa1P35242 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC13.7□□□□□ -0.22
Sftpa1P35242 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sftpa1P35242 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Sftpa1P35242 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Sftpa1P35242 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Sftpa1P35242 Gm8602-201ENSMUST00000184045 607 ntBASIC13.7□□□□□ -0.22
Sftpa1P35242 Mir7085-201ENSMUST00000184353 66 ntBASIC13.7□□□□□ -0.22
Sftpa1P35242 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Sftpa1P35242 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Sftpa1P35242 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.7□□□□□ -0.22
Sftpa1P35242 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sftpa1P35242 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sftpa1P35242 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Sftpa1P35242 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sftpa1P35242 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Sftpa1P35242 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sftpa1P35242 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sftpa1P35242 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sftpa1P35242 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sftpa1P35242 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sftpa1P35242 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Sftpa1P35242 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.7□□□□□ -0.22
Sftpa1P35242 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sftpa1P35242 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sftpa1P35242 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC13.69□□□□□ -0.22
Sftpa1P35242 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC13.69□□□□□ -0.22
Sftpa1P35242 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sftpa1P35242 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Sftpa1P35242 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Sftpa1P35242 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sftpa1P35242 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Sftpa1P35242 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sftpa1P35242 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sftpa1P35242 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sftpa1P35242 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sftpa1P35242 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sftpa1P35242 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC13.69□□□□□ -0.22
Sftpa1P35242 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC13.69□□□□□ -0.22
Sftpa1P35242 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sftpa1P35242 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sftpa1P35242 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sftpa1P35242 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Sftpa1P35242 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sftpa1P35242 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sftpa1P35242 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Sftpa1P35242 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sftpa1P35242 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Sftpa1P35242 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Sftpa1P35242 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
Sftpa1P35242 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC13.69□□□□□ -0.22
Sftpa1P35242 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sftpa1P35242 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sftpa1P35242 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Sftpa1P35242 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sftpa1P35242 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sftpa1P35242 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sftpa1P35242 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sftpa1P35242 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sftpa1P35242 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sftpa1P35242 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
Sftpa1P35242 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Sftpa1P35242 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sftpa1P35242 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sftpa1P35242 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sftpa1P35242 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sftpa1P35242 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Sftpa1P35242 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Sftpa1P35242 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Sftpa1P35242 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Sftpa1P35242 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC13.68□□□□□ -0.22
Sftpa1P35242 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC13.68□□□□□ -0.22
Sftpa1P35242 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sftpa1P35242 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC13.68□□□□□ -0.22
Sftpa1P35242 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC13.68□□□□□ -0.22
Sftpa1P35242 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sftpa1P35242 Gm18018-201ENSMUST00000198273 408 ntBASIC13.68□□□□□ -0.22
Sftpa1P35242 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sftpa1P35242 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sftpa1P35242 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Sftpa1P35242 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sftpa1P35242 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sftpa1P35242 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Sftpa1P35242 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms