Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp13P33435 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp13P33435 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Mmp13P33435 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp13P33435 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp13P33435 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Mmp13P33435 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Mmp13P33435 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp13P33435 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp13P33435 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp13P33435 Gm9856-201ENSMUST00000217077 2578 ntBASIC15.25■□□□□ 0.03
Mmp13P33435 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp13P33435 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC15.25■□□□□ 0.03
Mmp13P33435 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp13P33435 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC15.25■□□□□ 0.03
Mmp13P33435 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC15.25■□□□□ 0.03
Mmp13P33435 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
Mmp13P33435 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp13P33435 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp13P33435 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Mmp13P33435 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp13P33435 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp13P33435 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp13P33435 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp13P33435 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Mmp13P33435 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp13P33435 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp13P33435 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp13P33435 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp13P33435 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Mmp13P33435 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp13P33435 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp13P33435 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Mmp13P33435 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp13P33435 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp13P33435 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp13P33435 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Mmp13P33435 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Mmp13P33435 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Mmp13P33435 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Mmp13P33435 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Mmp13P33435 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Mmp13P33435 Gm42632-201ENSMUST00000201707 2411 ntBASIC15.24■□□□□ 0.03
Mmp13P33435 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Mmp13P33435 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Mmp13P33435 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Mmp13P33435 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Mmp13P33435 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Mmp13P33435 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC15.24■□□□□ 0.03
Mmp13P33435 Mir5126-201ENSMUST00000175513 77 ntBASIC15.24■□□□□ 0.03
Mmp13P33435 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC15.24■□□□□ 0.03
Mmp13P33435 AV026068-213ENSMUST00000223675 1171 ntBASIC15.24■□□□□ 0.03
Mmp13P33435 CT009510.1-201ENSMUST00000227972 270 ntBASIC15.24■□□□□ 0.03
Mmp13P33435 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Mmp13P33435 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Mmp13P33435 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Mmp13P33435 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Mmp13P33435 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Mmp13P33435 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Mmp13P33435 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Mmp13P33435 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Mmp13P33435 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC15.24■□□□□ 0.03
Mmp13P33435 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Mmp13P33435 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Mmp13P33435 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Mmp13P33435 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Mmp13P33435 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Mmp13P33435 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Mmp13P33435 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Mmp13P33435 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC15.23■□□□□ 0.03
Mmp13P33435 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Mmp13P33435 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Mmp13P33435 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Mmp13P33435 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Mmp13P33435 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Mmp13P33435 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC15.23■□□□□ 0.03
Mmp13P33435 Gm15358-201ENSMUST00000119249 520 ntBASIC15.23■□□□□ 0.03
Mmp13P33435 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Mmp13P33435 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC15.23■□□□□ 0.03
Mmp13P33435 Gm27646-201ENSMUST00000183989 110 ntBASIC15.23■□□□□ 0.03
Mmp13P33435 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC15.23■□□□□ 0.03
Mmp13P33435 Gm43514-201ENSMUST00000198852 424 ntBASIC15.23■□□□□ 0.03
Mmp13P33435 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Mmp13P33435 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Mmp13P33435 AC093926.2-201ENSMUST00000214468 1228 ntBASIC15.23■□□□□ 0.03
Mmp13P33435 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Mmp13P33435 Gm15590-201ENSMUST00000078419 552 ntBASIC15.23■□□□□ 0.03
Mmp13P33435 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Mmp13P33435 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Mmp13P33435 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Mmp13P33435 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Mmp13P33435 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Mmp13P33435 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Mmp13P33435 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Mmp13P33435 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Mmp13P33435 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC15.23■□□□□ 0.03
Mmp13P33435 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Mmp13P33435 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Mmp13P33435 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Mmp13P33435 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms