Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Pde6bP23440 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pde6bP23440 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pde6bP23440 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Pde6bP23440 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pde6bP23440 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pde6bP23440 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pde6bP23440 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pde6bP23440 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pde6bP23440 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC16.26■□□□□ 0.19
Pde6bP23440 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pde6bP23440 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pde6bP23440 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pde6bP23440 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pde6bP23440 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pde6bP23440 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pde6bP23440 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pde6bP23440 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pde6bP23440 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pde6bP23440 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pde6bP23440 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Pde6bP23440 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC16.26■□□□□ 0.19
Pde6bP23440 Gm27321-201ENSMUST00000185021 205 ntBASIC16.26■□□□□ 0.19
Pde6bP23440 Gm7556-201ENSMUST00000201178 1084 ntBASIC16.26■□□□□ 0.19
Pde6bP23440 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pde6bP23440 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pde6bP23440 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pde6bP23440 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Pde6bP23440 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pde6bP23440 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pde6bP23440 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pde6bP23440 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pde6bP23440 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pde6bP23440 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pde6bP23440 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pde6bP23440 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pde6bP23440 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pde6bP23440 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Pde6bP23440 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pde6bP23440 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Pde6bP23440 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pde6bP23440 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Pde6bP23440 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pde6bP23440 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pde6bP23440 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pde6bP23440 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pde6bP23440 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pde6bP23440 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pde6bP23440 Gm6973-201ENSMUST00000117080 721 ntBASIC16.25■□□□□ 0.19
Pde6bP23440 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC16.25■□□□□ 0.19
Pde6bP23440 CT010506.4-201ENSMUST00000225457 351 ntBASIC16.25■□□□□ 0.19
Pde6bP23440 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pde6bP23440 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC16.25■□□□□ 0.19
Pde6bP23440 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pde6bP23440 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pde6bP23440 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pde6bP23440 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pde6bP23440 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pde6bP23440 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC16.25■□□□□ 0.19
Pde6bP23440 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC16.25■□□□□ 0.19
Pde6bP23440 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pde6bP23440 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Pde6bP23440 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pde6bP23440 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pde6bP23440 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pde6bP23440 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pde6bP23440 Gm45293-201ENSMUST00000209754 1812 ntBASIC16.24■□□□□ 0.19
Pde6bP23440 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pde6bP23440 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Pde6bP23440 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pde6bP23440 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pde6bP23440 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pde6bP23440 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pde6bP23440 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Pde6bP23440 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC16.24■□□□□ 0.19
Pde6bP23440 Gm11543-201ENSMUST00000120758 370 ntBASIC16.24■□□□□ 0.19
Pde6bP23440 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC16.24■□□□□ 0.19
Pde6bP23440 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Pde6bP23440 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC16.24■□□□□ 0.19
Pde6bP23440 Gm18737-201ENSMUST00000173594 937 ntBASIC16.24■□□□□ 0.19
Pde6bP23440 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Pde6bP23440 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pde6bP23440 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Pde6bP23440 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pde6bP23440 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pde6bP23440 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
Pde6bP23440 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Pde6bP23440 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Pde6bP23440 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pde6bP23440 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pde6bP23440 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pde6bP23440 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pde6bP23440 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pde6bP23440 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pde6bP23440 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pde6bP23440 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC16.24■□□□□ 0.19
Pde6bP23440 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pde6bP23440 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pde6bP23440 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Pde6bP23440 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms