Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Clk1P22518 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clk1P22518 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clk1P22518 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clk1P22518 Gm11452-201ENSMUST00000122376 690 ntBASIC13.89□□□□□ -0.19
Clk1P22518 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC13.89□□□□□ -0.19
Clk1P22518 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Clk1P22518 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC13.89□□□□□ -0.19
Clk1P22518 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clk1P22518 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC13.89□□□□□ -0.19
Clk1P22518 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC13.89□□□□□ -0.19
Clk1P22518 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Clk1P22518 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Clk1P22518 Gm7787-201ENSMUST00000216858 688 ntBASIC13.89□□□□□ -0.19
Clk1P22518 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Clk1P22518 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clk1P22518 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clk1P22518 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clk1P22518 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Clk1P22518 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC13.89□□□□□ -0.19
Clk1P22518 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Clk1P22518 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clk1P22518 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clk1P22518 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clk1P22518 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clk1P22518 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC13.89□□□□□ -0.19
Clk1P22518 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clk1P22518 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clk1P22518 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clk1P22518 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Clk1P22518 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clk1P22518 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clk1P22518 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clk1P22518 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clk1P22518 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clk1P22518 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Clk1P22518 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
Clk1P22518 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Clk1P22518 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clk1P22518 Gm9768-201ENSMUST00000206007 2861 ntBASIC13.88□□□□□ -0.19
Clk1P22518 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clk1P22518 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clk1P22518 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC13.88□□□□□ -0.19
Clk1P22518 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC13.88□□□□□ -0.19
Clk1P22518 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clk1P22518 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Clk1P22518 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clk1P22518 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC13.88□□□□□ -0.19
Clk1P22518 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Clk1P22518 Gm27741-201ENSMUST00000185060 237 ntBASIC13.88□□□□□ -0.19
Clk1P22518 Gm5253-201ENSMUST00000187104 1025 ntBASIC13.88□□□□□ -0.19
Clk1P22518 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC13.88□□□□□ -0.19
Clk1P22518 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clk1P22518 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC13.88□□□□□ -0.19
Clk1P22518 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clk1P22518 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clk1P22518 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clk1P22518 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC13.88□□□□□ -0.19
Clk1P22518 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Clk1P22518 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clk1P22518 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clk1P22518 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Clk1P22518 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
Clk1P22518 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Clk1P22518 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC13.88□□□□□ -0.19
Clk1P22518 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Clk1P22518 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Clk1P22518 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clk1P22518 App-207ENSMUST00000227737 2827 ntBASIC13.88□□□□□ -0.19
Clk1P22518 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clk1P22518 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clk1P22518 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clk1P22518 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clk1P22518 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clk1P22518 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clk1P22518 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clk1P22518 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.87□□□□□ -0.19
Clk1P22518 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.87□□□□□ -0.19
Clk1P22518 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clk1P22518 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
Clk1P22518 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Clk1P22518 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
Clk1P22518 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Clk1P22518 Gm11453-201ENSMUST00000117318 1007 ntBASIC13.87□□□□□ -0.19
Clk1P22518 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC13.87□□□□□ -0.19
Clk1P22518 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Clk1P22518 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC13.87□□□□□ -0.19
Clk1P22518 AC151836.1-202ENSMUST00000226259 753 ntBASIC13.87□□□□□ -0.19
Clk1P22518 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clk1P22518 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clk1P22518 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clk1P22518 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clk1P22518 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clk1P22518 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Clk1P22518 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clk1P22518 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clk1P22518 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.87□□□□□ -0.19
Clk1P22518 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clk1P22518 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clk1P22518 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms