Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cxcl1P12850 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cxcl1P12850 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cxcl1P12850 Gm44291-201ENSMUST00000203102 2865 ntBASIC12.34□□□□□ -0.43
Cxcl1P12850 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Cxcl1P12850 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cxcl1P12850 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cxcl1P12850 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cxcl1P12850 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Cxcl1P12850 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cxcl1P12850 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cxcl1P12850 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
Cxcl1P12850 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC12.33□□□□□ -0.43
Cxcl1P12850 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Cxcl1P12850 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC12.33□□□□□ -0.43
Cxcl1P12850 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Cxcl1P12850 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Cxcl1P12850 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Cxcl1P12850 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Cxcl1P12850 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cxcl1P12850 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC12.33□□□□□ -0.44
Cxcl1P12850 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cxcl1P12850 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cxcl1P12850 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cxcl1P12850 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cxcl1P12850 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cxcl1P12850 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Cxcl1P12850 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cxcl1P12850 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC12.33□□□□□ -0.44
Cxcl1P12850 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cxcl1P12850 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cxcl1P12850 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cxcl1P12850 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cxcl1P12850 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cxcl1P12850 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cxcl1P12850 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cxcl1P12850 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cxcl1P12850 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cxcl1P12850 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cxcl1P12850 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cxcl1P12850 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cxcl1P12850 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cxcl1P12850 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cxcl1P12850 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cxcl1P12850 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cxcl1P12850 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cxcl1P12850 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cxcl1P12850 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC12.33□□□□□ -0.44
Cxcl1P12850 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cxcl1P12850 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cxcl1P12850 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cxcl1P12850 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cxcl1P12850 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cxcl1P12850 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cxcl1P12850 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cxcl1P12850 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cxcl1P12850 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cxcl1P12850 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cxcl1P12850 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cxcl1P12850 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cxcl1P12850 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cxcl1P12850 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cxcl1P12850 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cxcl1P12850 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cxcl1P12850 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC12.32□□□□□ -0.44
Cxcl1P12850 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC12.32□□□□□ -0.44
Cxcl1P12850 Gm27646-201ENSMUST00000183989 110 ntBASIC12.32□□□□□ -0.44
Cxcl1P12850 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cxcl1P12850 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Cxcl1P12850 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cxcl1P12850 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cxcl1P12850 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Cxcl1P12850 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cxcl1P12850 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cxcl1P12850 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cxcl1P12850 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cxcl1P12850 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cxcl1P12850 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cxcl1P12850 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cxcl1P12850 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Cxcl1P12850 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC12.32□□□□□ -0.44
Cxcl1P12850 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Cxcl1P12850 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cxcl1P12850 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cxcl1P12850 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cxcl1P12850 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cxcl1P12850 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cxcl1P12850 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cxcl1P12850 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cxcl1P12850 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cxcl1P12850 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cxcl1P12850 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC12.32□□□□□ -0.44
Cxcl1P12850 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cxcl1P12850 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cxcl1P12850 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Cxcl1P12850 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cxcl1P12850 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cxcl1P12850 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC12.31□□□□□ -0.44
Cxcl1P12850 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC12.31□□□□□ -0.44
Cxcl1P12850 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms