Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Col3a1P08121 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col3a1P08121 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Col3a1P08121 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col3a1P08121 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col3a1P08121 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col3a1P08121 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Col3a1P08121 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col3a1P08121 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col3a1P08121 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col3a1P08121 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC17.59■□□□□ 0.41
Col3a1P08121 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Col3a1P08121 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col3a1P08121 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Col3a1P08121 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Col3a1P08121 Gm45751-201ENSMUST00000210185 1573 ntBASIC17.59■□□□□ 0.41
Col3a1P08121 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col3a1P08121 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Col3a1P08121 Cd63-ps-201ENSMUST00000145417 875 ntBASIC17.59■□□□□ 0.41
Col3a1P08121 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Col3a1P08121 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC17.59■□□□□ 0.41
Col3a1P08121 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Col3a1P08121 AC124732.1-201ENSMUST00000221551 910 ntBASIC17.59■□□□□ 0.41
Col3a1P08121 Gm9229-201ENSMUST00000222777 126 ntBASIC17.59■□□□□ 0.41
Col3a1P08121 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col3a1P08121 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col3a1P08121 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col3a1P08121 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.59■□□□□ 0.41
Col3a1P08121 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col3a1P08121 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC17.59■□□□□ 0.41
Col3a1P08121 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
Col3a1P08121 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col3a1P08121 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Col3a1P08121 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col3a1P08121 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Col3a1P08121 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Col3a1P08121 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Col3a1P08121 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Col3a1P08121 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Col3a1P08121 Gm4204-201ENSMUST00000110798 1231 ntBASIC17.58■□□□□ 0.41
Col3a1P08121 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
Col3a1P08121 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Col3a1P08121 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Col3a1P08121 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col3a1P08121 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Col3a1P08121 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col3a1P08121 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Col3a1P08121 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col3a1P08121 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col3a1P08121 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC17.58■□□□□ 0.4
Col3a1P08121 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col3a1P08121 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col3a1P08121 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col3a1P08121 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC17.58■□□□□ 0.4
Col3a1P08121 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col3a1P08121 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col3a1P08121 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col3a1P08121 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col3a1P08121 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col3a1P08121 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col3a1P08121 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC17.57■□□□□ 0.4
Col3a1P08121 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC17.57■□□□□ 0.4
Col3a1P08121 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC17.57■□□□□ 0.4
Col3a1P08121 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Col3a1P08121 AC174678.1-201ENSMUST00000228007 2749 ntBASIC17.57■□□□□ 0.4
Col3a1P08121 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col3a1P08121 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col3a1P08121 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col3a1P08121 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col3a1P08121 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col3a1P08121 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col3a1P08121 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col3a1P08121 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col3a1P08121 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col3a1P08121 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col3a1P08121 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col3a1P08121 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Col3a1P08121 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col3a1P08121 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Col3a1P08121 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col3a1P08121 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col3a1P08121 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Col3a1P08121 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col3a1P08121 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Col3a1P08121 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Col3a1P08121 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC17.56■□□□□ 0.4
Col3a1P08121 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col3a1P08121 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col3a1P08121 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col3a1P08121 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col3a1P08121 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col3a1P08121 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col3a1P08121 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col3a1P08121 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Col3a1P08121 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Col3a1P08121 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Col3a1P08121 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Col3a1P08121 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC17.56■□□□□ 0.4
Col3a1P08121 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col3a1P08121 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms