Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
P04224 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC13.09□□□□□ -0.31
P04224 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P04224 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
P04224 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
P04224 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
P04224 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P04224 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
P04224 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
P04224 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P04224 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P04224 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P04224 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC13.09□□□□□ -0.31
P04224 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
P04224 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
P04224 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P04224 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
P04224 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
P04224 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC13.09□□□□□ -0.31
P04224 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC13.09□□□□□ -0.31
P04224 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC13.09□□□□□ -0.31
P04224 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P04224 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.09□□□□□ -0.31
P04224 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
P04224 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
P04224 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
P04224 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
P04224 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
P04224 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.09□□□□□ -0.31
P04224 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
P04224 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P04224 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
P04224 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P04224 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P04224 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P04224 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC13.09□□□□□ -0.31
P04224 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
P04224 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
P04224 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
P04224 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
P04224 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P04224 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
P04224 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
P04224 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
P04224 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
P04224 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
P04224 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC13.08□□□□□ -0.32
P04224 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
P04224 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P04224 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P04224 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
P04224 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
P04224 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC13.08□□□□□ -0.32
P04224 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P04224 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC13.08□□□□□ -0.32
P04224 Mir6404-201ENSMUST00000183699 94 ntBASIC13.08□□□□□ -0.32
P04224 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC13.08□□□□□ -0.32
P04224 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC13.08□□□□□ -0.32
P04224 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
P04224 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P04224 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
P04224 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P04224 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.08□□□□□ -0.32
P04224 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
P04224 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
P04224 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
P04224 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.08□□□□□ -0.32
P04224 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P04224 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P04224 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
P04224 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P04224 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P04224 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P04224 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P04224 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
P04224 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
P04224 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.07□□□□□ -0.32
P04224 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
P04224 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
P04224 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P04224 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
P04224 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P04224 Gm7669-201ENSMUST00000210184 1603 ntBASIC13.07□□□□□ -0.32
P04224 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P04224 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P04224 Gm6433-201ENSMUST00000118634 875 ntBASIC13.07□□□□□ -0.32
P04224 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
P04224 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC13.07□□□□□ -0.32
P04224 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
P04224 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P04224 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P04224 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
P04224 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P04224 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
P04224 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
P04224 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
P04224 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P04224 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P04224 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.07□□□□□ -0.32
P04224 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms