Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Best1O88870 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
Best1O88870 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Best1O88870 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Best1O88870 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Best1O88870 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Best1O88870 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Best1O88870 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Best1O88870 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Best1O88870 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.27□□□□□ -0.12
Best1O88870 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Best1O88870 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Best1O88870 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Best1O88870 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
Best1O88870 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Best1O88870 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Best1O88870 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC14.27□□□□□ -0.13
Best1O88870 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC14.27□□□□□ -0.13
Best1O88870 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Best1O88870 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Best1O88870 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC14.27□□□□□ -0.13
Best1O88870 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Best1O88870 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Best1O88870 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Best1O88870 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Best1O88870 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Best1O88870 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Best1O88870 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Best1O88870 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.27□□□□□ -0.13
Best1O88870 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
Best1O88870 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC14.27□□□□□ -0.13
Best1O88870 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Best1O88870 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Best1O88870 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.26□□□□□ -0.13
Best1O88870 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Best1O88870 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Best1O88870 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Best1O88870 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Best1O88870 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Best1O88870 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Best1O88870 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Best1O88870 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Best1O88870 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Best1O88870 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.26□□□□□ -0.13
Best1O88870 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Best1O88870 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Best1O88870 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Best1O88870 Gm25144-201ENSMUST00000179561 110 ntBASIC14.26□□□□□ -0.13
Best1O88870 Gm25352-201ENSMUST00000179815 110 ntBASIC14.26□□□□□ -0.13
Best1O88870 Gm18766-201ENSMUST00000189811 808 ntBASIC14.26□□□□□ -0.13
Best1O88870 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Best1O88870 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Best1O88870 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Best1O88870 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.26□□□□□ -0.13
Best1O88870 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Best1O88870 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Best1O88870 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Best1O88870 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Best1O88870 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.26□□□□□ -0.13
Best1O88870 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Best1O88870 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Best1O88870 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Best1O88870 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Best1O88870 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Best1O88870 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Best1O88870 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Best1O88870 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Best1O88870 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Best1O88870 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Best1O88870 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Best1O88870 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Best1O88870 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Best1O88870 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Best1O88870 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Best1O88870 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Best1O88870 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Best1O88870 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC14.25□□□□□ -0.13
Best1O88870 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Best1O88870 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC14.25□□□□□ -0.13
Best1O88870 Gm10576-201ENSMUST00000191927 825 ntBASIC14.25□□□□□ -0.13
Best1O88870 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Best1O88870 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Best1O88870 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Best1O88870 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Best1O88870 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Best1O88870 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Best1O88870 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Best1O88870 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Best1O88870 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Best1O88870 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.25□□□□□ -0.13
Best1O88870 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.25□□□□□ -0.13
Best1O88870 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Best1O88870 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Best1O88870 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Best1O88870 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Best1O88870 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Best1O88870 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
Best1O88870 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Best1O88870 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Best1O88870 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms