Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ClppO88696 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
ClppO88696 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ClppO88696 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.56□□□□□ -0.08
ClppO88696 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ClppO88696 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
ClppO88696 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
ClppO88696 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
ClppO88696 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
ClppO88696 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ClppO88696 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.55□□□□□ -0.08
ClppO88696 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
ClppO88696 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
ClppO88696 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ClppO88696 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ClppO88696 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ClppO88696 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
ClppO88696 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
ClppO88696 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.55□□□□□ -0.08
ClppO88696 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
ClppO88696 Gm27494-201ENSMUST00000184735 189 ntBASIC14.55□□□□□ -0.08
ClppO88696 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.55□□□□□ -0.08
ClppO88696 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
ClppO88696 Gm44492-201ENSMUST00000197012 141 ntBASIC14.55□□□□□ -0.08
ClppO88696 Gm45612-201ENSMUST00000211320 160 ntBASIC14.55□□□□□ -0.08
ClppO88696 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ClppO88696 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ClppO88696 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ClppO88696 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ClppO88696 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ClppO88696 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ClppO88696 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC14.55□□□□□ -0.08
ClppO88696 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
ClppO88696 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ClppO88696 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ClppO88696 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
ClppO88696 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ClppO88696 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
ClppO88696 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ClppO88696 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ClppO88696 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
ClppO88696 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ClppO88696 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ClppO88696 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ClppO88696 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ClppO88696 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
ClppO88696 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
ClppO88696 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
ClppO88696 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ClppO88696 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.54□□□□□ -0.08
ClppO88696 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC14.54□□□□□ -0.08
ClppO88696 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC14.54□□□□□ -0.08
ClppO88696 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
ClppO88696 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ClppO88696 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
ClppO88696 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
ClppO88696 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ClppO88696 Gm8396-201ENSMUST00000057361 823 ntBASIC14.54□□□□□ -0.08
ClppO88696 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14.54□□□□□ -0.08
ClppO88696 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
ClppO88696 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
ClppO88696 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
ClppO88696 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
ClppO88696 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
ClppO88696 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ClppO88696 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
ClppO88696 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
ClppO88696 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
ClppO88696 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ClppO88696 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ClppO88696 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
ClppO88696 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ClppO88696 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ClppO88696 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
ClppO88696 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
ClppO88696 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
ClppO88696 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
ClppO88696 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
ClppO88696 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ClppO88696 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
ClppO88696 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
ClppO88696 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ClppO88696 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ClppO88696 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
ClppO88696 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
ClppO88696 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ClppO88696 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
ClppO88696 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
ClppO88696 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
ClppO88696 Gm15427-201ENSMUST00000117288 531 ntBASIC14.53□□□□□ -0.08
ClppO88696 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC14.53□□□□□ -0.08
ClppO88696 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC14.53□□□□□ -0.08
ClppO88696 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC14.53□□□□□ -0.08
ClppO88696 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
ClppO88696 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC14.53□□□□□ -0.08
ClppO88696 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
ClppO88696 AC124549.3-201ENSMUST00000225541 367 ntBASIC14.53□□□□□ -0.08
ClppO88696 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
ClppO88696 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ClppO88696 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms