Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cops6O88545 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC18.1■□□□□ 0.49
Cops6O88545 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cops6O88545 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cops6O88545 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cops6O88545 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC18.1■□□□□ 0.49
Cops6O88545 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Cops6O88545 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cops6O88545 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cops6O88545 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Cops6O88545 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cops6O88545 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cops6O88545 Gm23547-201ENSMUST00000158210 271 ntBASIC18.1■□□□□ 0.49
Cops6O88545 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cops6O88545 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cops6O88545 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Cops6O88545 Gm29310-201ENSMUST00000185468 696 ntBASIC18.1■□□□□ 0.49
Cops6O88545 Gm21825-201ENSMUST00000185728 696 ntBASIC18.1■□□□□ 0.49
Cops6O88545 Gm29109-201ENSMUST00000185895 696 ntBASIC18.1■□□□□ 0.49
Cops6O88545 Gm21896-201ENSMUST00000186520 696 ntBASIC18.1■□□□□ 0.49
Cops6O88545 Gm21873-201ENSMUST00000186728 696 ntBASIC18.1■□□□□ 0.49
Cops6O88545 Gm21794-201ENSMUST00000187056 696 ntBASIC18.1■□□□□ 0.49
Cops6O88545 Gm21880-201ENSMUST00000187275 696 ntBASIC18.1■□□□□ 0.49
Cops6O88545 Gm21826-201ENSMUST00000187451 696 ntBASIC18.1■□□□□ 0.49
Cops6O88545 Gm21198-201ENSMUST00000188393 696 ntBASIC18.1■□□□□ 0.49
Cops6O88545 Gm21749-201ENSMUST00000189343 696 ntBASIC18.1■□□□□ 0.49
Cops6O88545 Gm21901-201ENSMUST00000189568 696 ntBASIC18.1■□□□□ 0.49
Cops6O88545 Gm29424-201ENSMUST00000189716 696 ntBASIC18.1■□□□□ 0.49
Cops6O88545 Gm28599-201ENSMUST00000189838 694 ntBASIC18.1■□□□□ 0.49
Cops6O88545 Gm21867-201ENSMUST00000189917 696 ntBASIC18.1■□□□□ 0.49
Cops6O88545 Gm29269-201ENSMUST00000190087 696 ntBASIC18.1■□□□□ 0.49
Cops6O88545 Gm21722-201ENSMUST00000190153 696 ntBASIC18.1■□□□□ 0.49
Cops6O88545 Gm28423-201ENSMUST00000190701 696 ntBASIC18.1■□□□□ 0.49
Cops6O88545 Gm21899-201ENSMUST00000190745 696 ntBASIC18.1■□□□□ 0.49
Cops6O88545 Gm21910-201ENSMUST00000191163 696 ntBASIC18.1■□□□□ 0.49
Cops6O88545 Gm21849-201ENSMUST00000191571 696 ntBASIC18.1■□□□□ 0.49
Cops6O88545 Gm28678-201ENSMUST00000191593 696 ntBASIC18.1■□□□□ 0.49
Cops6O88545 Gm20910-201ENSMUST00000193268 696 ntBASIC18.1■□□□□ 0.49
Cops6O88545 Gm21871-201ENSMUST00000194621 696 ntBASIC18.1■□□□□ 0.49
Cops6O88545 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC18.1■□□□□ 0.49
Cops6O88545 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cops6O88545 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cops6O88545 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cops6O88545 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cops6O88545 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cops6O88545 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cops6O88545 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC18.1■□□□□ 0.49
Cops6O88545 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cops6O88545 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cops6O88545 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cops6O88545 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cops6O88545 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cops6O88545 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Cops6O88545 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cops6O88545 Gm21009-201ENSMUST00000197169 1669 ntBASIC18.09■□□□□ 0.49
Cops6O88545 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cops6O88545 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cops6O88545 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cops6O88545 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cops6O88545 Gm14719-201ENSMUST00000121891 340 ntBASIC18.09■□□□□ 0.49
Cops6O88545 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC18.09■□□□□ 0.49
Cops6O88545 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC18.09■□□□□ 0.49
Cops6O88545 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cops6O88545 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cops6O88545 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cops6O88545 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cops6O88545 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cops6O88545 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cops6O88545 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Cops6O88545 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cops6O88545 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cops6O88545 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cops6O88545 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cops6O88545 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cops6O88545 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC18.08■□□□□ 0.49
Cops6O88545 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cops6O88545 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cops6O88545 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cops6O88545 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Cops6O88545 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC18.08■□□□□ 0.49
Cops6O88545 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Cops6O88545 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cops6O88545 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC18.08■□□□□ 0.48
Cops6O88545 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Cops6O88545 Gm5186-201ENSMUST00000218781 920 ntBASIC18.08■□□□□ 0.48
Cops6O88545 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Cops6O88545 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Cops6O88545 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cops6O88545 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cops6O88545 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cops6O88545 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC18.08■□□□□ 0.48
Cops6O88545 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cops6O88545 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cops6O88545 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cops6O88545 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cops6O88545 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC18.07■□□□□ 0.48
Cops6O88545 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
Cops6O88545 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cops6O88545 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cops6O88545 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms