Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Tgfbr3O88393 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Tgfbr3O88393 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tgfbr3O88393 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.1□□□□□ -0.15
Tgfbr3O88393 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tgfbr3O88393 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tgfbr3O88393 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tgfbr3O88393 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tgfbr3O88393 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tgfbr3O88393 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
Tgfbr3O88393 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tgfbr3O88393 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tgfbr3O88393 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC14.1□□□□□ -0.15
Tgfbr3O88393 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC14.1□□□□□ -0.15
Tgfbr3O88393 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Tgfbr3O88393 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Tgfbr3O88393 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC14.1□□□□□ -0.15
Tgfbr3O88393 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tgfbr3O88393 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tgfbr3O88393 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tgfbr3O88393 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tgfbr3O88393 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Tgfbr3O88393 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tgfbr3O88393 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tgfbr3O88393 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tgfbr3O88393 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tgfbr3O88393 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tgfbr3O88393 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Tgfbr3O88393 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tgfbr3O88393 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tgfbr3O88393 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Tgfbr3O88393 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tgfbr3O88393 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tgfbr3O88393 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Tgfbr3O88393 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tgfbr3O88393 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tgfbr3O88393 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Tgfbr3O88393 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tgfbr3O88393 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Tgfbr3O88393 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Tgfbr3O88393 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tgfbr3O88393 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tgfbr3O88393 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Tgfbr3O88393 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC14.09□□□□□ -0.15
Tgfbr3O88393 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tgfbr3O88393 Gm4204-201ENSMUST00000110798 1231 ntBASIC14.09□□□□□ -0.15
Tgfbr3O88393 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC14.09□□□□□ -0.15
Tgfbr3O88393 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tgfbr3O88393 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC14.09□□□□□ -0.15
Tgfbr3O88393 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tgfbr3O88393 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tgfbr3O88393 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tgfbr3O88393 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Tgfbr3O88393 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tgfbr3O88393 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Tgfbr3O88393 Gm5320-201ENSMUST00000207163 1519 ntBASIC14.09□□□□□ -0.15
Tgfbr3O88393 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Tgfbr3O88393 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC14.09□□□□□ -0.15
Tgfbr3O88393 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Tgfbr3O88393 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Tgfbr3O88393 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Tgfbr3O88393 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Tgfbr3O88393 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.15
Tgfbr3O88393 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Tgfbr3O88393 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Tgfbr3O88393 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Tgfbr3O88393 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Tgfbr3O88393 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.08□□□□□ -0.15
Tgfbr3O88393 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Tgfbr3O88393 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.08□□□□□ -0.16
Tgfbr3O88393 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tgfbr3O88393 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tgfbr3O88393 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Tgfbr3O88393 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Tgfbr3O88393 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Tgfbr3O88393 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Tgfbr3O88393 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Tgfbr3O88393 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC14.08□□□□□ -0.16
Tgfbr3O88393 Gm24694-201ENSMUST00000180054 110 ntBASIC14.08□□□□□ -0.16
Tgfbr3O88393 Gm27663-201ENSMUST00000184839 110 ntBASIC14.08□□□□□ -0.16
Tgfbr3O88393 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC14.08□□□□□ -0.16
Tgfbr3O88393 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Tgfbr3O88393 Gm9794-201ENSMUST00000202370 423 ntBASIC14.08□□□□□ -0.16
Tgfbr3O88393 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tgfbr3O88393 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC14.08□□□□□ -0.16
Tgfbr3O88393 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.08□□□□□ -0.16
Tgfbr3O88393 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tgfbr3O88393 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tgfbr3O88393 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tgfbr3O88393 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tgfbr3O88393 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tgfbr3O88393 App-207ENSMUST00000227737 2827 ntBASIC14.08□□□□□ -0.16
Tgfbr3O88393 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tgfbr3O88393 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tgfbr3O88393 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tgfbr3O88393 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tgfbr3O88393 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tgfbr3O88393 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Tgfbr3O88393 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tgfbr3O88393 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms