Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Trav13-3-201ENSMUST00000117226 336 ntBASIC15.51■□□□□ 0.07
Ttc3O88196 Gm11424-201ENSMUST00000121929 829 ntBASIC15.51■□□□□ 0.07
Ttc3O88196 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC15.51■□□□□ 0.07
Ttc3O88196 Gm44855-201ENSMUST00000205725 362 ntBASIC15.51■□□□□ 0.07
Ttc3O88196 Hist1h2al-201ENSMUST00000091708 339 ntBASIC15.51■□□□□ 0.07
Ttc3O88196 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ttc3O88196 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ttc3O88196 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC15.51■□□□□ 0.07
Ttc3O88196 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ttc3O88196 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ttc3O88196 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ttc3O88196 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ttc3O88196 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ttc3O88196 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Ttc3O88196 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ttc3O88196 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ttc3O88196 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ttc3O88196 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ttc3O88196 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Ttc3O88196 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ttc3O88196 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ttc3O88196 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ttc3O88196 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ttc3O88196 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Ttc3O88196 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ttc3O88196 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ttc3O88196 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ttc3O88196 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC15.5■□□□□ 0.07
Ttc3O88196 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ttc3O88196 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ttc3O88196 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Ttc3O88196 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ttc3O88196 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Ttc3O88196 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ttc3O88196 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Ttc3O88196 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ttc3O88196 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
Ttc3O88196 Gm15487-201ENSMUST00000122373 465 ntBASIC15.49■□□□□ 0.07
Ttc3O88196 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
Ttc3O88196 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ttc3O88196 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ttc3O88196 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ttc3O88196 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ttc3O88196 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ttc3O88196 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ttc3O88196 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ttc3O88196 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC15.49■□□□□ 0.07
Ttc3O88196 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ttc3O88196 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ttc3O88196 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ttc3O88196 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
Ttc3O88196 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ttc3O88196 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ttc3O88196 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ttc3O88196 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC15.49■□□□□ 0.07
Ttc3O88196 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC15.49■□□□□ 0.07
Ttc3O88196 Gm29667-201ENSMUST00000190817 490 ntBASIC15.49■□□□□ 0.07
Ttc3O88196 Gm5186-201ENSMUST00000218781 920 ntBASIC15.49■□□□□ 0.07
Ttc3O88196 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ttc3O88196 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ttc3O88196 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC15.49■□□□□ 0.07
Ttc3O88196 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Ttc3O88196 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ttc3O88196 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC15.49■□□□□ 0.07
Ttc3O88196 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ttc3O88196 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Ttc3O88196 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ttc3O88196 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ttc3O88196 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ttc3O88196 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ttc3O88196 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ttc3O88196 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Ttc3O88196 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ttc3O88196 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Ttc3O88196 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ttc3O88196 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Ttc3O88196 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ttc3O88196 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ttc3O88196 Gm22189-201ENSMUST00000103822 86 ntBASIC15.48■□□□□ 0.07
Ttc3O88196 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC15.48■□□□□ 0.07
Ttc3O88196 Gm30437-201ENSMUST00000206086 1201 ntBASIC15.48■□□□□ 0.07
Ttc3O88196 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ttc3O88196 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Ttc3O88196 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ttc3O88196 BC001981-202ENSMUST00000191393 1545 ntBASIC15.48■□□□□ 0.07
Ttc3O88196 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ttc3O88196 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ttc3O88196 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ttc3O88196 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ttc3O88196 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ttc3O88196 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ttc3O88196 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Ttc3O88196 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Ttc3O88196 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC15.47■□□□□ 0.07
Ttc3O88196 Gm42612-201ENSMUST00000197986 623 ntBASIC15.47■□□□□ 0.07
Ttc3O88196 Gm43170-201ENSMUST00000199827 612 ntBASIC15.47■□□□□ 0.07
Ttc3O88196 Gm42632-201ENSMUST00000201707 2411 ntBASIC15.47■□□□□ 0.07
Ttc3O88196 AC124732.1-201ENSMUST00000221551 910 ntBASIC15.47■□□□□ 0.07
Ttc3O88196 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ttc3O88196 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms