Protein–RNA interactions for Protein: O55142

Rpl35a, 60S ribosomal protein L35a, mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl35aO55142 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rpl35aO55142 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rpl35aO55142 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC11.1□□□□□ -0.63
Rpl35aO55142 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rpl35aO55142 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rpl35aO55142 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rpl35aO55142 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Rpl35aO55142 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rpl35aO55142 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rpl35aO55142 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rpl35aO55142 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rpl35aO55142 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rpl35aO55142 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC11.1□□□□□ -0.63
Rpl35aO55142 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rpl35aO55142 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC11.1□□□□□ -0.63
Rpl35aO55142 Gm44492-201ENSMUST00000197012 141 ntBASIC11.1□□□□□ -0.63
Rpl35aO55142 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC11.1□□□□□ -0.63
Rpl35aO55142 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rpl35aO55142 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rpl35aO55142 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rpl35aO55142 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rpl35aO55142 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rpl35aO55142 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rpl35aO55142 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rpl35aO55142 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rpl35aO55142 Gm13294-201ENSMUST00000121757 1330 ntBASIC11.09□□□□□ -0.63
Rpl35aO55142 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rpl35aO55142 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rpl35aO55142 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rpl35aO55142 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
Rpl35aO55142 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rpl35aO55142 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rpl35aO55142 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rpl35aO55142 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rpl35aO55142 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Rpl35aO55142 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rpl35aO55142 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Rpl35aO55142 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rpl35aO55142 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rpl35aO55142 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rpl35aO55142 Gm4913-201ENSMUST00000117075 1290 ntBASIC11.09□□□□□ -0.63
Rpl35aO55142 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC11.09□□□□□ -0.63
Rpl35aO55142 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rpl35aO55142 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rpl35aO55142 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC11.09□□□□□ -0.63
Rpl35aO55142 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC11.09□□□□□ -0.63
Rpl35aO55142 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC11.09□□□□□ -0.63
Rpl35aO55142 Gm44945-201ENSMUST00000206764 1187 ntBASIC11.09□□□□□ -0.63
Rpl35aO55142 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rpl35aO55142 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rpl35aO55142 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Rpl35aO55142 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rpl35aO55142 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rpl35aO55142 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Rpl35aO55142 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rpl35aO55142 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC11.09□□□□□ -0.63
Rpl35aO55142 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rpl35aO55142 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rpl35aO55142 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rpl35aO55142 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rpl35aO55142 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC11.09□□□□□ -0.63
Rpl35aO55142 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rpl35aO55142 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rpl35aO55142 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rpl35aO55142 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rpl35aO55142 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rpl35aO55142 AC119177.1-201ENSMUST00000227647 1332 ntBASIC11.09□□□□□ -0.63
Rpl35aO55142 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Rpl35aO55142 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rpl35aO55142 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC11.08□□□□□ -0.64
Rpl35aO55142 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rpl35aO55142 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rpl35aO55142 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rpl35aO55142 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rpl35aO55142 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Rpl35aO55142 Gm45293-201ENSMUST00000209754 1812 ntBASIC11.08□□□□□ -0.64
Rpl35aO55142 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC11.08□□□□□ -0.64
Rpl35aO55142 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rpl35aO55142 Gm4995-201ENSMUST00000117247 432 ntBASIC11.08□□□□□ -0.64
Rpl35aO55142 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rpl35aO55142 Gm6736-201ENSMUST00000166583 948 ntBASIC11.08□□□□□ -0.64
Rpl35aO55142 Gm24513-201ENSMUST00000174964 138 ntBASIC11.08□□□□□ -0.64
Rpl35aO55142 Gm27702-201ENSMUST00000184512 56 ntBASIC11.08□□□□□ -0.64
Rpl35aO55142 Gm27397-201ENSMUST00000184997 107 ntBASIC11.08□□□□□ -0.64
Rpl35aO55142 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rpl35aO55142 Gm43073-201ENSMUST00000198200 1189 ntBASIC11.08□□□□□ -0.64
Rpl35aO55142 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rpl35aO55142 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rpl35aO55142 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rpl35aO55142 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rpl35aO55142 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rpl35aO55142 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rpl35aO55142 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Rpl35aO55142 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rpl35aO55142 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rpl35aO55142 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Rpl35aO55142 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Rpl35aO55142 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Rpl35aO55142 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC11.08□□□□□ -0.64
Rpl35aO55142 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms