Protein–RNA interactions for Protein: O54788

Dffb, DNA fragmentation factor subunit beta, mousemouse

Known RBP Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffbO54788 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
DffbO54788 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
DffbO54788 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC12.81□□□□□ -0.36
DffbO54788 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC12.81□□□□□ -0.36
DffbO54788 AC153889.1-201ENSMUST00000219257 330 ntBASIC12.81□□□□□ -0.36
DffbO54788 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
DffbO54788 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC12.81□□□□□ -0.36
DffbO54788 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
DffbO54788 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
DffbO54788 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
DffbO54788 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
DffbO54788 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
DffbO54788 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
DffbO54788 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
DffbO54788 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
DffbO54788 Gm5837-201ENSMUST00000191844 1369 ntBASIC12.81□□□□□ -0.36
DffbO54788 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
DffbO54788 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
DffbO54788 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
DffbO54788 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC12.8□□□□□ -0.36
DffbO54788 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
DffbO54788 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
DffbO54788 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
DffbO54788 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
DffbO54788 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
DffbO54788 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
DffbO54788 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
DffbO54788 Gm42632-201ENSMUST00000201707 2411 ntBASIC12.8□□□□□ -0.36
DffbO54788 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
DffbO54788 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
DffbO54788 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
DffbO54788 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
DffbO54788 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
DffbO54788 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
DffbO54788 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC12.8□□□□□ -0.36
DffbO54788 Gm15372-201ENSMUST00000120729 834 ntBASIC12.8□□□□□ -0.36
DffbO54788 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
DffbO54788 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
DffbO54788 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
DffbO54788 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
DffbO54788 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
DffbO54788 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
DffbO54788 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
DffbO54788 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
DffbO54788 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
DffbO54788 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
DffbO54788 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
DffbO54788 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
DffbO54788 Gm37019-201ENSMUST00000192133 2134 ntBASIC12.8□□□□□ -0.36
DffbO54788 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
DffbO54788 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
DffbO54788 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
DffbO54788 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
DffbO54788 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
DffbO54788 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
DffbO54788 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
DffbO54788 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
DffbO54788 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
DffbO54788 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
DffbO54788 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DffbO54788 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
DffbO54788 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DffbO54788 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
DffbO54788 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
DffbO54788 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DffbO54788 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
DffbO54788 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DffbO54788 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DffbO54788 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DffbO54788 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
DffbO54788 Gm7935-201ENSMUST00000100555 1278 ntBASIC12.79□□□□□ -0.36
DffbO54788 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DffbO54788 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
DffbO54788 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
DffbO54788 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DffbO54788 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DffbO54788 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
DffbO54788 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
DffbO54788 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC12.79□□□□□ -0.36
DffbO54788 CT009510.1-201ENSMUST00000227972 270 ntBASIC12.79□□□□□ -0.36
DffbO54788 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DffbO54788 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
DffbO54788 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DffbO54788 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DffbO54788 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DffbO54788 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
DffbO54788 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DffbO54788 Gm9856-201ENSMUST00000217077 2578 ntBASIC12.79□□□□□ -0.36
DffbO54788 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DffbO54788 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DffbO54788 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
DffbO54788 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC12.79□□□□□ -0.36
DffbO54788 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
DffbO54788 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DffbO54788 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DffbO54788 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
DffbO54788 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
DffbO54788 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
DffbO54788 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
DffbO54788 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms