Protein–RNA interactions for Protein: O54689

Ccr6, C-C chemokine receptor type 6, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr6O54689 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccr6O54689 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccr6O54689 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccr6O54689 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ccr6O54689 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Ccr6O54689 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccr6O54689 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccr6O54689 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC12.49□□□□□ -0.41
Ccr6O54689 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccr6O54689 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccr6O54689 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ccr6O54689 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ccr6O54689 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccr6O54689 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC12.48□□□□□ -0.41
Ccr6O54689 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccr6O54689 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Ccr6O54689 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Ccr6O54689 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Ccr6O54689 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccr6O54689 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccr6O54689 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Ccr6O54689 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccr6O54689 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC12.48□□□□□ -0.41
Ccr6O54689 Gm13436-201ENSMUST00000120418 567 ntBASIC12.48□□□□□ -0.41
Ccr6O54689 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccr6O54689 Gm20760-201ENSMUST00000179197 648 ntBASIC12.48□□□□□ -0.41
Ccr6O54689 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccr6O54689 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccr6O54689 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccr6O54689 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccr6O54689 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccr6O54689 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccr6O54689 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccr6O54689 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Ccr6O54689 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccr6O54689 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccr6O54689 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccr6O54689 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Ccr6O54689 Gm7901-201ENSMUST00000120430 1597 ntBASIC12.47□□□□□ -0.41
Ccr6O54689 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccr6O54689 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC12.47□□□□□ -0.41
Ccr6O54689 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccr6O54689 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccr6O54689 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccr6O54689 Gm29361-201ENSMUST00000183323 2000 ntBASIC12.47□□□□□ -0.41
Ccr6O54689 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccr6O54689 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccr6O54689 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccr6O54689 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccr6O54689 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Ccr6O54689 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccr6O54689 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccr6O54689 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccr6O54689 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccr6O54689 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccr6O54689 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccr6O54689 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccr6O54689 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC12.47□□□□□ -0.41
Ccr6O54689 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccr6O54689 Gm45058-201ENSMUST00000205810 766 ntBASIC12.47□□□□□ -0.41
Ccr6O54689 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC12.47□□□□□ -0.41
Ccr6O54689 AC159205.6-201ENSMUST00000224935 887 ntBASIC12.47□□□□□ -0.41
Ccr6O54689 Gm5417-201ENSMUST00000079706 384 ntBASIC12.47□□□□□ -0.41
Ccr6O54689 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Ccr6O54689 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccr6O54689 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC12.47□□□□□ -0.41
Ccr6O54689 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccr6O54689 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccr6O54689 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccr6O54689 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Ccr6O54689 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccr6O54689 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Ccr6O54689 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Ccr6O54689 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccr6O54689 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccr6O54689 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccr6O54689 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccr6O54689 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccr6O54689 AC157650.3-201ENSMUST00000225058 1476 ntBASIC12.46□□□□□ -0.41
Ccr6O54689 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccr6O54689 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccr6O54689 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccr6O54689 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.41
Ccr6O54689 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Ccr6O54689 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccr6O54689 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Ccr6O54689 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ccr6O54689 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccr6O54689 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccr6O54689 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ccr6O54689 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccr6O54689 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ccr6O54689 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccr6O54689 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
Ccr6O54689 Gm13168-201ENSMUST00000121771 632 ntBASIC12.46□□□□□ -0.41
Ccr6O54689 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC12.46□□□□□ -0.41
Ccr6O54689 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ccr6O54689 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC12.46□□□□□ -0.41
Ccr6O54689 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Ccr6O54689 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms