Protein–RNA interactions for Protein: O35451

Atf6b, Cyclic AMP-dependent transcription factor ATF-6 beta, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6bO35451 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Atf6bO35451 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Atf6bO35451 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC12.95□□□□□ -0.34
Atf6bO35451 Gm27300-201ENSMUST00000184085 97 ntBASIC12.95□□□□□ -0.34
Atf6bO35451 Gm27525-201ENSMUST00000184465 107 ntBASIC12.95□□□□□ -0.34
Atf6bO35451 Gm27335-201ENSMUST00000184758 97 ntBASIC12.95□□□□□ -0.34
Atf6bO35451 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Atf6bO35451 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Atf6bO35451 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC12.95□□□□□ -0.34
Atf6bO35451 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Atf6bO35451 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Atf6bO35451 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Atf6bO35451 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC12.95□□□□□ -0.34
Atf6bO35451 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Atf6bO35451 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC12.95□□□□□ -0.34
Atf6bO35451 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Atf6bO35451 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC12.95□□□□□ -0.34
Atf6bO35451 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Atf6bO35451 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC12.95□□□□□ -0.34
Atf6bO35451 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Atf6bO35451 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Atf6bO35451 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Atf6bO35451 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Atf6bO35451 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Atf6bO35451 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Atf6bO35451 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Atf6bO35451 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Atf6bO35451 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Atf6bO35451 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Atf6bO35451 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Atf6bO35451 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Atf6bO35451 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
Atf6bO35451 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Atf6bO35451 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Atf6bO35451 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Atf6bO35451 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Atf6bO35451 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Atf6bO35451 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Atf6bO35451 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Atf6bO35451 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Atf6bO35451 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC12.94□□□□□ -0.34
Atf6bO35451 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Atf6bO35451 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Atf6bO35451 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC12.94□□□□□ -0.34
Atf6bO35451 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC12.94□□□□□ -0.34
Atf6bO35451 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Atf6bO35451 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC12.94□□□□□ -0.34
Atf6bO35451 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Atf6bO35451 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC12.94□□□□□ -0.34
Atf6bO35451 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC12.94□□□□□ -0.34
Atf6bO35451 Gm7556-201ENSMUST00000201178 1084 ntBASIC12.94□□□□□ -0.34
Atf6bO35451 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Atf6bO35451 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Atf6bO35451 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Atf6bO35451 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC12.94□□□□□ -0.34
Atf6bO35451 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Atf6bO35451 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC12.94□□□□□ -0.34
Atf6bO35451 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Atf6bO35451 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Atf6bO35451 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Atf6bO35451 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Atf6bO35451 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Atf6bO35451 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Atf6bO35451 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Atf6bO35451 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Atf6bO35451 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Atf6bO35451 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Atf6bO35451 Gm5184-201ENSMUST00000220417 1702 ntBASIC12.93□□□□□ -0.34
Atf6bO35451 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Atf6bO35451 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Atf6bO35451 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Atf6bO35451 Gm5366-201ENSMUST00000215494 1338 ntBASIC12.93□□□□□ -0.34
Atf6bO35451 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Atf6bO35451 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Atf6bO35451 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
Atf6bO35451 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Atf6bO35451 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Atf6bO35451 Gm9727-201ENSMUST00000161387 555 ntBASIC12.93□□□□□ -0.34
Atf6bO35451 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Atf6bO35451 Gm10499-201ENSMUST00000174094 934 ntBASIC12.93□□□□□ -0.34
Atf6bO35451 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC12.93□□□□□ -0.34
Atf6bO35451 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC12.93□□□□□ -0.34
Atf6bO35451 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Atf6bO35451 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Atf6bO35451 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Atf6bO35451 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Atf6bO35451 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Atf6bO35451 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Atf6bO35451 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Atf6bO35451 Gm7901-201ENSMUST00000120430 1597 ntBASIC12.93□□□□□ -0.34
Atf6bO35451 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Atf6bO35451 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Atf6bO35451 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Atf6bO35451 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Atf6bO35451 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC12.93□□□□□ -0.34
Atf6bO35451 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Atf6bO35451 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Atf6bO35451 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Atf6bO35451 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Atf6bO35451 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms