Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh9F8VPK8 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh9F8VPK8 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh9F8VPK8 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh9F8VPK8 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh9F8VPK8 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh9F8VPK8 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Pcdh9F8VPK8 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC15.27■□□□□ 0.04
Pcdh9F8VPK8 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Pcdh9F8VPK8 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC15.27■□□□□ 0.04
Pcdh9F8VPK8 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC15.27■□□□□ 0.04
Pcdh9F8VPK8 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC15.27■□□□□ 0.04
Pcdh9F8VPK8 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC15.27■□□□□ 0.04
Pcdh9F8VPK8 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh9F8VPK8 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Pcdh9F8VPK8 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh9F8VPK8 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh9F8VPK8 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdh9F8VPK8 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdh9F8VPK8 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdh9F8VPK8 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdh9F8VPK8 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdh9F8VPK8 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Pcdh9F8VPK8 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC15.27■□□□□ 0.03
Pcdh9F8VPK8 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdh9F8VPK8 Ap5m1-205ENSMUST00000227431 3757 ntBASIC15.27■□□□□ 0.03
Pcdh9F8VPK8 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdh9F8VPK8 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Pcdh9F8VPK8 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh9F8VPK8 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh9F8VPK8 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC15.26■□□□□ 0.03
Pcdh9F8VPK8 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh9F8VPK8 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh9F8VPK8 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh9F8VPK8 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.26■□□□□ 0.03
Pcdh9F8VPK8 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Pcdh9F8VPK8 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Pcdh9F8VPK8 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh9F8VPK8 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Pcdh9F8VPK8 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh9F8VPK8 Gm13884-201ENSMUST00000118103 829 ntBASIC15.26■□□□□ 0.03
Pcdh9F8VPK8 Gm11764-201ENSMUST00000120221 623 ntBASIC15.26■□□□□ 0.03
Pcdh9F8VPK8 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh9F8VPK8 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh9F8VPK8 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh9F8VPK8 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh9F8VPK8 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Pcdh9F8VPK8 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC15.26■□□□□ 0.03
Pcdh9F8VPK8 Gm7787-201ENSMUST00000216858 688 ntBASIC15.26■□□□□ 0.03
Pcdh9F8VPK8 AC147366.1-201ENSMUST00000227671 852 ntBASIC15.26■□□□□ 0.03
Pcdh9F8VPK8 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh9F8VPK8 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC15.26■□□□□ 0.03
Pcdh9F8VPK8 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh9F8VPK8 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Pcdh9F8VPK8 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh9F8VPK8 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh9F8VPK8 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh9F8VPK8 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh9F8VPK8 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC15.25■□□□□ 0.03
Pcdh9F8VPK8 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Pcdh9F8VPK8 Gm43205-201ENSMUST00000198622 1968 ntBASIC15.25■□□□□ 0.03
Pcdh9F8VPK8 Gm44645-201ENSMUST00000205492 1653 ntBASIC15.25■□□□□ 0.03
Pcdh9F8VPK8 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh9F8VPK8 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh9F8VPK8 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh9F8VPK8 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh9F8VPK8 AC148324.1-201ENSMUST00000219034 4240 ntBASIC15.25■□□□□ 0.03
Pcdh9F8VPK8 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh9F8VPK8 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh9F8VPK8 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh9F8VPK8 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh9F8VPK8 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh9F8VPK8 Gm7862-201ENSMUST00000121461 292 ntBASIC15.25■□□□□ 0.03
Pcdh9F8VPK8 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh9F8VPK8 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC15.25■□□□□ 0.03
Pcdh9F8VPK8 CT010506.4-201ENSMUST00000225457 351 ntBASIC15.25■□□□□ 0.03
Pcdh9F8VPK8 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh9F8VPK8 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh9F8VPK8 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh9F8VPK8 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC15.25■□□□□ 0.03
Pcdh9F8VPK8 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh9F8VPK8 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Pcdh9F8VPK8 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Pcdh9F8VPK8 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
Pcdh9F8VPK8 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Pcdh9F8VPK8 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh9F8VPK8 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Pcdh9F8VPK8 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh9F8VPK8 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh9F8VPK8 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh9F8VPK8 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh9F8VPK8 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh9F8VPK8 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Pcdh9F8VPK8 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Pcdh9F8VPK8 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh9F8VPK8 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh9F8VPK8 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh9F8VPK8 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh9F8VPK8 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh9F8VPK8 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms