Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hfm1D3Z4R1 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hfm1D3Z4R1 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hfm1D3Z4R1 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Hfm1D3Z4R1 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Hfm1D3Z4R1 Gm8062-201ENSMUST00000139696 444 ntBASIC20.59■□□□□ 0.89
Hfm1D3Z4R1 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC20.59■□□□□ 0.89
Hfm1D3Z4R1 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hfm1D3Z4R1 Gm17794-201ENSMUST00000220252 955 ntBASIC20.59■□□□□ 0.89
Hfm1D3Z4R1 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Hfm1D3Z4R1 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Hfm1D3Z4R1 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hfm1D3Z4R1 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Hfm1D3Z4R1 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC20.58■□□□□ 0.89
Hfm1D3Z4R1 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Hfm1D3Z4R1 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Hfm1D3Z4R1 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Hfm1D3Z4R1 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC20.58■□□□□ 0.89
Hfm1D3Z4R1 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC20.58■□□□□ 0.89
Hfm1D3Z4R1 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Hfm1D3Z4R1 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Hfm1D3Z4R1 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.88
Hfm1D3Z4R1 Gm45841-201ENSMUST00000207700 164 ntBASIC20.58■□□□□ 0.88
Hfm1D3Z4R1 AC156560.2-201ENSMUST00000221232 264 ntBASIC20.58■□□□□ 0.88
Hfm1D3Z4R1 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Hfm1D3Z4R1 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Hfm1D3Z4R1 Gm42690-201ENSMUST00000197921 1836 ntBASIC20.58■□□□□ 0.88
Hfm1D3Z4R1 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Hfm1D3Z4R1 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Hfm1D3Z4R1 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Hfm1D3Z4R1 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hfm1D3Z4R1 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hfm1D3Z4R1 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hfm1D3Z4R1 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hfm1D3Z4R1 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Hfm1D3Z4R1 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hfm1D3Z4R1 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Hfm1D3Z4R1 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hfm1D3Z4R1 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hfm1D3Z4R1 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hfm1D3Z4R1 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hfm1D3Z4R1 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hfm1D3Z4R1 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Hfm1D3Z4R1 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Hfm1D3Z4R1 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hfm1D3Z4R1 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC20.57■□□□□ 0.88
Hfm1D3Z4R1 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hfm1D3Z4R1 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hfm1D3Z4R1 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hfm1D3Z4R1 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hfm1D3Z4R1 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Hfm1D3Z4R1 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hfm1D3Z4R1 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Hfm1D3Z4R1 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hfm1D3Z4R1 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hfm1D3Z4R1 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Hfm1D3Z4R1 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Hfm1D3Z4R1 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Hfm1D3Z4R1 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC20.56■□□□□ 0.88
Hfm1D3Z4R1 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hfm1D3Z4R1 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hfm1D3Z4R1 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hfm1D3Z4R1 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
Hfm1D3Z4R1 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hfm1D3Z4R1 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hfm1D3Z4R1 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Hfm1D3Z4R1 Gm14660-201ENSMUST00000119809 575 ntBASIC20.55■□□□□ 0.88
Hfm1D3Z4R1 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC20.55■□□□□ 0.88
Hfm1D3Z4R1 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC20.55■□□□□ 0.88
Hfm1D3Z4R1 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hfm1D3Z4R1 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC20.55■□□□□ 0.88
Hfm1D3Z4R1 Gm21470-201ENSMUST00000187680 696 ntBASIC20.55■□□□□ 0.88
Hfm1D3Z4R1 Gm45784-201ENSMUST00000188360 142 ntBASIC20.55■□□□□ 0.88
Hfm1D3Z4R1 Gm5425-201ENSMUST00000214125 459 ntBASIC20.55■□□□□ 0.88
Hfm1D3Z4R1 Gm17795-201ENSMUST00000214505 757 ntBASIC20.55■□□□□ 0.88
Hfm1D3Z4R1 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hfm1D3Z4R1 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Hfm1D3Z4R1 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Hfm1D3Z4R1 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hfm1D3Z4R1 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Hfm1D3Z4R1 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Hfm1D3Z4R1 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hfm1D3Z4R1 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
Hfm1D3Z4R1 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Hfm1D3Z4R1 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hfm1D3Z4R1 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Hfm1D3Z4R1 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
Hfm1D3Z4R1 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hfm1D3Z4R1 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hfm1D3Z4R1 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC20.54■□□□□ 0.88
Hfm1D3Z4R1 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Hfm1D3Z4R1 Mup-ps23-201ENSMUST00000118063 630 ntBASIC20.54■□□□□ 0.88
Hfm1D3Z4R1 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC20.54■□□□□ 0.88
Hfm1D3Z4R1 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC20.54■□□□□ 0.88
Hfm1D3Z4R1 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hfm1D3Z4R1 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Hfm1D3Z4R1 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Hfm1D3Z4R1 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hfm1D3Z4R1 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hfm1D3Z4R1 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms