Protein–RNA interactions for Protein: B2RUQ2

Usf3, Gene model 608, (NCBI), mousemouse

Predictions only

Length 2,221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf3B2RUQ2 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Usf3B2RUQ2 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Usf3B2RUQ2 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usf3B2RUQ2 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usf3B2RUQ2 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usf3B2RUQ2 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Usf3B2RUQ2 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usf3B2RUQ2 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Usf3B2RUQ2 Nrn1-204ENSMUST00000224323 1779 ntBASIC12.43□□□□□ -0.42
Usf3B2RUQ2 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC12.43□□□□□ -0.42
Usf3B2RUQ2 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC12.43□□□□□ -0.42
Usf3B2RUQ2 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usf3B2RUQ2 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Usf3B2RUQ2 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Usf3B2RUQ2 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usf3B2RUQ2 AC119177.1-201ENSMUST00000227647 1332 ntBASIC12.43□□□□□ -0.42
Usf3B2RUQ2 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Usf3B2RUQ2 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Usf3B2RUQ2 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usf3B2RUQ2 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usf3B2RUQ2 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usf3B2RUQ2 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usf3B2RUQ2 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Usf3B2RUQ2 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usf3B2RUQ2 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usf3B2RUQ2 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usf3B2RUQ2 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC12.43□□□□□ -0.42
Usf3B2RUQ2 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usf3B2RUQ2 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC12.43□□□□□ -0.42
Usf3B2RUQ2 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC12.43□□□□□ -0.42
Usf3B2RUQ2 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC12.43□□□□□ -0.42
Usf3B2RUQ2 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Usf3B2RUQ2 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usf3B2RUQ2 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC12.43□□□□□ -0.42
Usf3B2RUQ2 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC12.43□□□□□ -0.42
Usf3B2RUQ2 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC12.43□□□□□ -0.42
Usf3B2RUQ2 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usf3B2RUQ2 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Usf3B2RUQ2 Gm9682-201ENSMUST00000197505 556 ntBASIC12.43□□□□□ -0.42
Usf3B2RUQ2 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usf3B2RUQ2 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Usf3B2RUQ2 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Usf3B2RUQ2 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Usf3B2RUQ2 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usf3B2RUQ2 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usf3B2RUQ2 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usf3B2RUQ2 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usf3B2RUQ2 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Usf3B2RUQ2 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usf3B2RUQ2 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usf3B2RUQ2 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usf3B2RUQ2 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Usf3B2RUQ2 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usf3B2RUQ2 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usf3B2RUQ2 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Usf3B2RUQ2 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usf3B2RUQ2 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Usf3B2RUQ2 Gm12892-201ENSMUST00000117367 1146 ntBASIC12.42□□□□□ -0.42
Usf3B2RUQ2 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC12.42□□□□□ -0.42
Usf3B2RUQ2 Gm7286-201ENSMUST00000182691 1007 ntBASIC12.42□□□□□ -0.42
Usf3B2RUQ2 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC12.42□□□□□ -0.42
Usf3B2RUQ2 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Usf3B2RUQ2 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Usf3B2RUQ2 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Usf3B2RUQ2 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Usf3B2RUQ2 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usf3B2RUQ2 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usf3B2RUQ2 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Usf3B2RUQ2 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usf3B2RUQ2 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Usf3B2RUQ2 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC12.42□□□□□ -0.42
Usf3B2RUQ2 Gm5049-201ENSMUST00000195878 1590 ntBASIC12.42□□□□□ -0.42
Usf3B2RUQ2 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usf3B2RUQ2 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Usf3B2RUQ2 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Usf3B2RUQ2 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC12.42□□□□□ -0.42
Usf3B2RUQ2 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC12.42□□□□□ -0.42
Usf3B2RUQ2 Gm27301-201ENSMUST00000184012 127 ntBASIC12.42□□□□□ -0.42
Usf3B2RUQ2 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Usf3B2RUQ2 AC158538.2-201ENSMUST00000225455 906 ntBASIC12.42□□□□□ -0.42
Usf3B2RUQ2 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usf3B2RUQ2 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usf3B2RUQ2 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC12.42□□□□□ -0.42
Usf3B2RUQ2 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usf3B2RUQ2 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usf3B2RUQ2 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usf3B2RUQ2 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Usf3B2RUQ2 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usf3B2RUQ2 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Usf3B2RUQ2 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usf3B2RUQ2 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usf3B2RUQ2 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usf3B2RUQ2 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usf3B2RUQ2 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usf3B2RUQ2 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Usf3B2RUQ2 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Usf3B2RUQ2 Gm17271-201ENSMUST00000165535 355 ntBASIC12.41□□□□□ -0.42
Usf3B2RUQ2 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Usf3B2RUQ2 Gm19164-201ENSMUST00000210667 640 ntBASIC12.41□□□□□ -0.42
Usf3B2RUQ2 Gm18246-201ENSMUST00000221023 728 ntBASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms