Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Gm12887B1AVM1 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm12887B1AVM1 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm12887B1AVM1 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm12887B1AVM1 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC12.06□□□□□ -0.48
Gm12887B1AVM1 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm12887B1AVM1 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm12887B1AVM1 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Gm12887B1AVM1 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
Gm12887B1AVM1 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Gm12887B1AVM1 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm12887B1AVM1 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Gm12887B1AVM1 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm12887B1AVM1 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC12.06□□□□□ -0.48
Gm12887B1AVM1 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
Gm12887B1AVM1 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm12887B1AVM1 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC12.06□□□□□ -0.48
Gm12887B1AVM1 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC12.06□□□□□ -0.48
Gm12887B1AVM1 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC12.06□□□□□ -0.48
Gm12887B1AVM1 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC12.06□□□□□ -0.48
Gm12887B1AVM1 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC12.06□□□□□ -0.48
Gm12887B1AVM1 Gm37055-201ENSMUST00000191866 133 ntBASIC12.06□□□□□ -0.48
Gm12887B1AVM1 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC12.06□□□□□ -0.48
Gm12887B1AVM1 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm12887B1AVM1 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm12887B1AVM1 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm12887B1AVM1 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm12887B1AVM1 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm12887B1AVM1 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm12887B1AVM1 Gm28182-201ENSMUST00000188354 2477 ntBASIC12.06□□□□□ -0.48
Gm12887B1AVM1 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC12.06□□□□□ -0.48
Gm12887B1AVM1 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm12887B1AVM1 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm12887B1AVM1 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm12887B1AVM1 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Gm12887B1AVM1 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm12887B1AVM1 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm12887B1AVM1 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm12887B1AVM1 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm12887B1AVM1 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm12887B1AVM1 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm12887B1AVM1 Gm44981-201ENSMUST00000205549 1943 ntBASIC12.05□□□□□ -0.48
Gm12887B1AVM1 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Gm12887B1AVM1 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
Gm12887B1AVM1 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Gm12887B1AVM1 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Gm12887B1AVM1 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Gm12887B1AVM1 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Gm12887B1AVM1 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Gm12887B1AVM1 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Gm12887B1AVM1 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Gm12887B1AVM1 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Gm12887B1AVM1 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Gm12887B1AVM1 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Gm12887B1AVM1 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Gm12887B1AVM1 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Gm12887B1AVM1 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC12.05□□□□□ -0.48
Gm12887B1AVM1 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Gm12887B1AVM1 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC12.05□□□□□ -0.48
Gm12887B1AVM1 Gm22697-201ENSMUST00000175194 63 ntBASIC12.05□□□□□ -0.48
Gm12887B1AVM1 Gm9484-201ENSMUST00000195892 1159 ntBASIC12.05□□□□□ -0.48
Gm12887B1AVM1 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Gm12887B1AVM1 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Gm12887B1AVM1 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC12.05□□□□□ -0.48
Gm12887B1AVM1 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Gm12887B1AVM1 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Gm12887B1AVM1 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Gm12887B1AVM1 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Gm12887B1AVM1 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Gm12887B1AVM1 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Gm12887B1AVM1 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Gm12887B1AVM1 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Gm12887B1AVM1 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Gm12887B1AVM1 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Gm12887B1AVM1 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Gm12887B1AVM1 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Gm12887B1AVM1 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Gm12887B1AVM1 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Gm12887B1AVM1 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Gm12887B1AVM1 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC12.05□□□□□ -0.48
Gm12887B1AVM1 Gm19863-201ENSMUST00000192480 2218 ntBASIC12.05□□□□□ -0.48
Gm12887B1AVM1 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Gm12887B1AVM1 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Gm12887B1AVM1 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Gm12887B1AVM1 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Gm12887B1AVM1 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Gm12887B1AVM1 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Gm12887B1AVM1 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Gm12887B1AVM1 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Gm12887B1AVM1 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Gm12887B1AVM1 Gm21009-201ENSMUST00000197169 1669 ntBASIC12.04□□□□□ -0.48
Gm12887B1AVM1 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Gm12887B1AVM1 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Gm12887B1AVM1 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Gm12887B1AVM1 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Gm12887B1AVM1 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Gm12887B1AVM1 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC12.04□□□□□ -0.48
Gm12887B1AVM1 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC12.04□□□□□ -0.48
Gm12887B1AVM1 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC12.04□□□□□ -0.48
Gm12887B1AVM1 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms