Protein–RNA interactions for Protein: A2ACP1

Ttc39a, Tetratricopeptide repeat protein 39A, mousemouse

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39aA2ACP1 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ttc39aA2ACP1 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ttc39aA2ACP1 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ttc39aA2ACP1 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Ttc39aA2ACP1 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ttc39aA2ACP1 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ttc39aA2ACP1 Gm13517-201ENSMUST00000120782 1495 ntBASIC14.57□□□□□ -0.08
Ttc39aA2ACP1 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Ttc39aA2ACP1 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ttc39aA2ACP1 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.57□□□□□ -0.08
Ttc39aA2ACP1 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ttc39aA2ACP1 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ttc39aA2ACP1 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ttc39aA2ACP1 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ttc39aA2ACP1 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ttc39aA2ACP1 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ttc39aA2ACP1 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ttc39aA2ACP1 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ttc39aA2ACP1 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ttc39aA2ACP1 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ttc39aA2ACP1 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ttc39aA2ACP1 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ttc39aA2ACP1 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ttc39aA2ACP1 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ttc39aA2ACP1 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ttc39aA2ACP1 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ttc39aA2ACP1 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Ttc39aA2ACP1 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ttc39aA2ACP1 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC14.56□□□□□ -0.08
Ttc39aA2ACP1 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ttc39aA2ACP1 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ttc39aA2ACP1 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ttc39aA2ACP1 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ttc39aA2ACP1 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ttc39aA2ACP1 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ttc39aA2ACP1 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ttc39aA2ACP1 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ttc39aA2ACP1 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ttc39aA2ACP1 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.56□□□□□ -0.08
Ttc39aA2ACP1 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ttc39aA2ACP1 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ttc39aA2ACP1 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ttc39aA2ACP1 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ttc39aA2ACP1 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ttc39aA2ACP1 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ttc39aA2ACP1 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Ttc39aA2ACP1 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ttc39aA2ACP1 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Ttc39aA2ACP1 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ttc39aA2ACP1 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.55□□□□□ -0.08
Ttc39aA2ACP1 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Ttc39aA2ACP1 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Ttc39aA2ACP1 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ttc39aA2ACP1 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ttc39aA2ACP1 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ttc39aA2ACP1 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ttc39aA2ACP1 Gm5779-201ENSMUST00000218467 910 ntBASIC14.55□□□□□ -0.08
Ttc39aA2ACP1 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ttc39aA2ACP1 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.55□□□□□ -0.08
Ttc39aA2ACP1 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ttc39aA2ACP1 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ttc39aA2ACP1 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ttc39aA2ACP1 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC14.55□□□□□ -0.08
Ttc39aA2ACP1 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Ttc39aA2ACP1 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ttc39aA2ACP1 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ttc39aA2ACP1 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ttc39aA2ACP1 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ttc39aA2ACP1 Sybu-209ENSMUST00000228639 4113 ntBASIC14.55□□□□□ -0.08
Ttc39aA2ACP1 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ttc39aA2ACP1 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ttc39aA2ACP1 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ttc39aA2ACP1 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ttc39aA2ACP1 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ttc39aA2ACP1 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ttc39aA2ACP1 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ttc39aA2ACP1 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ttc39aA2ACP1 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC14.54□□□□□ -0.08
Ttc39aA2ACP1 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC14.54□□□□□ -0.08
Ttc39aA2ACP1 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Ttc39aA2ACP1 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ttc39aA2ACP1 Gm27321-201ENSMUST00000185021 205 ntBASIC14.54□□□□□ -0.08
Ttc39aA2ACP1 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ttc39aA2ACP1 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Ttc39aA2ACP1 Gm18049-201ENSMUST00000208909 581 ntBASIC14.54□□□□□ -0.08
Ttc39aA2ACP1 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.54□□□□□ -0.08
Ttc39aA2ACP1 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ttc39aA2ACP1 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Ttc39aA2ACP1 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ttc39aA2ACP1 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ttc39aA2ACP1 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ttc39aA2ACP1 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Ttc39aA2ACP1 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ttc39aA2ACP1 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ttc39aA2ACP1 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ttc39aA2ACP1 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ttc39aA2ACP1 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ttc39aA2ACP1 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ttc39aA2ACP1 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ttc39aA2ACP1 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms