Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Scn8aQ9WTU3 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Scn8aQ9WTU3 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Scn8aQ9WTU3 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Scn8aQ9WTU3 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Scn8aQ9WTU3 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC14.93□□□□□ -0.02
Scn8aQ9WTU3 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Scn8aQ9WTU3 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.93□□□□□ -0.02
Scn8aQ9WTU3 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Scn8aQ9WTU3 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scn8aQ9WTU3 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scn8aQ9WTU3 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scn8aQ9WTU3 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scn8aQ9WTU3 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Scn8aQ9WTU3 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scn8aQ9WTU3 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Scn8aQ9WTU3 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC14.92□□□□□ -0.02
Scn8aQ9WTU3 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.92□□□□□ -0.02
Scn8aQ9WTU3 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Scn8aQ9WTU3 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scn8aQ9WTU3 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scn8aQ9WTU3 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scn8aQ9WTU3 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scn8aQ9WTU3 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Scn8aQ9WTU3 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scn8aQ9WTU3 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scn8aQ9WTU3 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scn8aQ9WTU3 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scn8aQ9WTU3 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Scn8aQ9WTU3 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Scn8aQ9WTU3 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scn8aQ9WTU3 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC14.92□□□□□ -0.02
Scn8aQ9WTU3 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC14.92□□□□□ -0.02
Scn8aQ9WTU3 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.92□□□□□ -0.02
Scn8aQ9WTU3 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scn8aQ9WTU3 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Scn8aQ9WTU3 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scn8aQ9WTU3 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scn8aQ9WTU3 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scn8aQ9WTU3 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Scn8aQ9WTU3 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scn8aQ9WTU3 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scn8aQ9WTU3 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Scn8aQ9WTU3 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scn8aQ9WTU3 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scn8aQ9WTU3 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.91□□□□□ -0.02
Scn8aQ9WTU3 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.91□□□□□ -0.02
Scn8aQ9WTU3 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.91□□□□□ -0.02
Scn8aQ9WTU3 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Scn8aQ9WTU3 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scn8aQ9WTU3 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Scn8aQ9WTU3 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scn8aQ9WTU3 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scn8aQ9WTU3 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Scn8aQ9WTU3 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scn8aQ9WTU3 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Scn8aQ9WTU3 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scn8aQ9WTU3 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scn8aQ9WTU3 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.91□□□□□ -0.02
Scn8aQ9WTU3 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Scn8aQ9WTU3 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC14.91□□□□□ -0.02
Scn8aQ9WTU3 Gm22175-201ENSMUST00000175007 78 ntBASIC14.91□□□□□ -0.02
Scn8aQ9WTU3 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC14.91□□□□□ -0.02
Scn8aQ9WTU3 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.91□□□□□ -0.02
Scn8aQ9WTU3 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC14.91□□□□□ -0.02
Scn8aQ9WTU3 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scn8aQ9WTU3 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scn8aQ9WTU3 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.91□□□□□ -0.02
Scn8aQ9WTU3 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scn8aQ9WTU3 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scn8aQ9WTU3 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Scn8aQ9WTU3 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scn8aQ9WTU3 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scn8aQ9WTU3 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scn8aQ9WTU3 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.9□□□□□ -0.02
Scn8aQ9WTU3 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scn8aQ9WTU3 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scn8aQ9WTU3 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scn8aQ9WTU3 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scn8aQ9WTU3 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scn8aQ9WTU3 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scn8aQ9WTU3 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scn8aQ9WTU3 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scn8aQ9WTU3 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC14.9□□□□□ -0.02
Scn8aQ9WTU3 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Scn8aQ9WTU3 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC14.9□□□□□ -0.02
Scn8aQ9WTU3 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.9□□□□□ -0.02
Scn8aQ9WTU3 Gm10275-202ENSMUST00000168697 495 ntBASIC14.9□□□□□ -0.02
Scn8aQ9WTU3 Gm18766-201ENSMUST00000189811 808 ntBASIC14.9□□□□□ -0.02
Scn8aQ9WTU3 Gm43703-201ENSMUST00000200523 763 ntBASIC14.9□□□□□ -0.02
Scn8aQ9WTU3 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scn8aQ9WTU3 Gm10275-201ENSMUST00000092620 635 ntBASIC14.9□□□□□ -0.02
Scn8aQ9WTU3 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scn8aQ9WTU3 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scn8aQ9WTU3 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scn8aQ9WTU3 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Scn8aQ9WTU3 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scn8aQ9WTU3 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Scn8aQ9WTU3 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Scn8aQ9WTU3 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms