Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Msh5Q9QUM7 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Msh5Q9QUM7 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Msh5Q9QUM7 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Msh5Q9QUM7 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Msh5Q9QUM7 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Msh5Q9QUM7 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
Msh5Q9QUM7 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Msh5Q9QUM7 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC15.38■□□□□ 0.05
Msh5Q9QUM7 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC15.38■□□□□ 0.05
Msh5Q9QUM7 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Msh5Q9QUM7 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Msh5Q9QUM7 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Msh5Q9QUM7 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC15.38■□□□□ 0.05
Msh5Q9QUM7 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Msh5Q9QUM7 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Msh5Q9QUM7 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Msh5Q9QUM7 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Msh5Q9QUM7 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Msh5Q9QUM7 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Msh5Q9QUM7 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Msh5Q9QUM7 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Msh5Q9QUM7 Ipcef1-209ENSMUST00000170680 1174 ntTSL 5 BASIC15.38■□□□□ 0.05
Msh5Q9QUM7 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC15.38■□□□□ 0.05
Msh5Q9QUM7 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC15.38■□□□□ 0.05
Msh5Q9QUM7 Olfr851-201ENSMUST00000064582 939 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Msh5Q9QUM7 Gm5169-201ENSMUST00000096469 768 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Msh5Q9QUM7 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Msh5Q9QUM7 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Msh5Q9QUM7 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC15.38■□□□□ 0.05
Msh5Q9QUM7 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Msh5Q9QUM7 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Msh5Q9QUM7 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Msh5Q9QUM7 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
Msh5Q9QUM7 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Msh5Q9QUM7 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Msh5Q9QUM7 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Msh5Q9QUM7 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Msh5Q9QUM7 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC15.38■□□□□ 0.05
Msh5Q9QUM7 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Msh5Q9QUM7 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Msh5Q9QUM7 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Msh5Q9QUM7 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Msh5Q9QUM7 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Msh5Q9QUM7 Gm10676-201ENSMUST00000098778 3221 ntBASIC15.37■□□□□ 0.05
Msh5Q9QUM7 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Msh5Q9QUM7 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Msh5Q9QUM7 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC15.37■□□□□ 0.05
Msh5Q9QUM7 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC15.37■□□□□ 0.05
Msh5Q9QUM7 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Msh5Q9QUM7 Gm44353-201ENSMUST00000200618 138 ntBASIC15.37■□□□□ 0.05
Msh5Q9QUM7 Gm30437-201ENSMUST00000206086 1201 ntBASIC15.37■□□□□ 0.05
Msh5Q9QUM7 6430710M23Rik-201ENSMUST00000210843 1191 ntBASIC15.37■□□□□ 0.05
Msh5Q9QUM7 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Msh5Q9QUM7 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Msh5Q9QUM7 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Msh5Q9QUM7 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC15.37■□□□□ 0.05
Msh5Q9QUM7 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Msh5Q9QUM7 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Msh5Q9QUM7 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Msh5Q9QUM7 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Msh5Q9QUM7 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Msh5Q9QUM7 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Msh5Q9QUM7 Gm5837-201ENSMUST00000191844 1369 ntBASIC15.36■□□□□ 0.05
Msh5Q9QUM7 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Msh5Q9QUM7 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC15.36■□□□□ 0.05
Msh5Q9QUM7 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Msh5Q9QUM7 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC15.36■□□□□ 0.05
Msh5Q9QUM7 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
Msh5Q9QUM7 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Msh5Q9QUM7 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Msh5Q9QUM7 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Msh5Q9QUM7 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Msh5Q9QUM7 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC15.36■□□□□ 0.05
Msh5Q9QUM7 Gm7286-201ENSMUST00000182691 1007 ntBASIC15.36■□□□□ 0.05
Msh5Q9QUM7 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Msh5Q9QUM7 Gm44357-201ENSMUST00000195897 142 ntBASIC15.36■□□□□ 0.05
Msh5Q9QUM7 Gm19658-201ENSMUST00000196231 138 ntBASIC15.36■□□□□ 0.05
Msh5Q9QUM7 Gm44367-201ENSMUST00000196836 138 ntBASIC15.36■□□□□ 0.05
Msh5Q9QUM7 Gm44350-201ENSMUST00000197197 138 ntBASIC15.36■□□□□ 0.05
Msh5Q9QUM7 Gm44390-201ENSMUST00000197533 144 ntBASIC15.36■□□□□ 0.05
Msh5Q9QUM7 Gm44313-201ENSMUST00000198018 138 ntBASIC15.36■□□□□ 0.05
Msh5Q9QUM7 Gm44486-201ENSMUST00000198508 138 ntBASIC15.36■□□□□ 0.05
Msh5Q9QUM7 Gm44314-201ENSMUST00000199263 138 ntBASIC15.36■□□□□ 0.05
Msh5Q9QUM7 Gm44394-201ENSMUST00000199558 138 ntBASIC15.36■□□□□ 0.05
Msh5Q9QUM7 Gm44484-201ENSMUST00000199873 138 ntBASIC15.36■□□□□ 0.05
Msh5Q9QUM7 Gm44466-201ENSMUST00000200264 138 ntBASIC15.36■□□□□ 0.05
Msh5Q9QUM7 Gm44359-201ENSMUST00000200671 138 ntBASIC15.36■□□□□ 0.05
Msh5Q9QUM7 A930002H02Rik-201ENSMUST00000208672 1178 ntBASIC15.36■□□□□ 0.05
Msh5Q9QUM7 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Msh5Q9QUM7 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC15.36■□□□□ 0.05
Msh5Q9QUM7 Tas2r117-201ENSMUST00000068302 1158 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Msh5Q9QUM7 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Msh5Q9QUM7 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Msh5Q9QUM7 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Msh5Q9QUM7 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Msh5Q9QUM7 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Msh5Q9QUM7 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Msh5Q9QUM7 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC15.36■□□□□ 0.05
Msh5Q9QUM7 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms