Protein–RNA interactions for Protein: Q9NRR4

DROSHA, Ribonuclease 3, humanhuman

Known RBP eCLIP

Length 1,374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DROSHAQ9NRR4 RAP1B-223ENST00000541167 561 ntTSL 430.72■■■□□ 2.516e-8■□□□□ 11.2
DROSHAQ9NRR4 RAP1B-206ENST00000425247 855 ntTSL 530.47■■■□□ 2.476e-8■□□□□ 11.2
DROSHAQ9NRR4 RAP1B-222ENST00000540781 571 ntTSL 430.47■■■□□ 2.476e-8■□□□□ 11.2
DROSHAQ9NRR4 RAP1B-227ENST00000542018 633 ntTSL 430.41■■■□□ 2.466e-8■□□□□ 11.2
DROSHAQ9NRR4 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC29.83■■■□□ 2.376e-8■□□□□ 11.2
DROSHAQ9NRR4 RAP1B-205ENST00000422358 468 ntTSL 429.83■■■□□ 2.376e-8■□□□□ 11.2
DROSHAQ9NRR4 RAP1B-208ENST00000453560 530 ntTSL 429.83■■■□□ 2.376e-8■□□□□ 11.2
DROSHAQ9NRR4 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC29.83■■■□□ 2.376e-8■□□□□ 11.2
DROSHAQ9NRR4 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC29.56■■■□□ 2.326e-8■□□□□ 11.2
DROSHAQ9NRR4 RAP1B-225ENST00000541386 480 ntTSL 428.98■■■□□ 2.236e-8■□□□□ 11.2
DROSHAQ9NRR4 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC28.98■■■□□ 2.236e-8■□□□□ 11.2
DROSHAQ9NRR4 RAP1B-232ENST00000545270 640 ntTSL 328.98■■■□□ 2.236e-8■□□□□ 11.2
DROSHAQ9NRR4 RAP1B-210ENST00000463493 781 ntTSL 426.92■■□□□ 1.96e-8■□□□□ 11.2
DROSHAQ9NRR4 RAP1B-211ENST00000485252 312 ntTSL 526.88■■□□□ 1.896e-8■□□□□ 11.2
DROSHAQ9NRR4 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.966e-8■□□□□ 11.2
DROSHAQ9NRR4 RAP1B-230ENST00000543697 734 ntTSL 3 BASIC11.37□□□□□ -0.596e-8■□□□□ 11.2
DROSHAQ9NRR4 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.56e-8■□□□□ 11.2
DROSHAQ9NRR4 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC3.35□□□□□ -1.876e-8■□□□□ 11.2
DROSHAQ9NRR4 FASN-211ENST00000637026 100 ntTSL 517.03■□□□□ 0.325e-9■□□□□ 11.2
DROSHAQ9NRR4 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC21.61■■□□□ 1.052e-9■□□□□ 11.2
DROSHAQ9NRR4 SETD5-203ENST00000402198 6827 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.512e-9■□□□□ 11.2
DROSHAQ9NRR4 SETD5-204ENST00000406341 6582 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.742e-9■□□□□ 11.2
DROSHAQ9NRR4 SETD5-202ENST00000399686 3362 ntTSL 510.19□□□□□ -0.782e-9■□□□□ 11.2
DROSHAQ9NRR4 SETD5-205ENST00000407969 6463 ntTSL 5 BASIC9.02□□□□□ -0.972e-9■□□□□ 11.2
DROSHAQ9NRR4 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC23.89■■□□□ 1.411e-7■□□□□ 11.2
DROSHAQ9NRR4 GREB1-202ENST00000263834 2448 ntTSL 1 (best) BASIC14.98□□□□□ -0.011e-7■□□□□ 11.2
DROSHAQ9NRR4 GREB1-203ENST00000381483 2347 ntTSL 1 (best) BASIC14.24□□□□□ -0.131e-7■□□□□ 11.2
DROSHAQ9NRR4 GREB1-204ENST00000381486 8484 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.271e-7■□□□□ 11.2
DROSHAQ9NRR4 GREB1-201ENST00000234142 8444 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.351e-7■□□□□ 11.2
DROSHAQ9NRR4 RAB17-208ENST00000430445 421 ntTSL 522.06■■□□□ 1.127e-7■□□□□ 11.2
DROSHAQ9NRR4 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC25.69■■□□□ 1.76e-6■□□□□ 11.2
DROSHAQ9NRR4 TMEM45B-204ENST00000527754 888 ntTSL 511.48□□□□□ -0.576e-6■□□□□ 11.2
DROSHAQ9NRR4 TMEM45B-203ENST00000525709 247 ntTSL 511.42□□□□□ -0.586e-6■□□□□ 11.2
DROSHAQ9NRR4 TMEM45B-205ENST00000529381 515 ntTSL 210.45□□□□□ -0.746e-6■□□□□ 11.2
DROSHAQ9NRR4 AC005307.1-201ENST00000567877 1570 ntTSL 3 BASIC14.65□□□□□ -0.062e-7■□□□□ 11.2
DROSHAQ9NRR4 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC39.19■■■■□ 3.863e-9■□□□□ 11.2
DROSHAQ9NRR4 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.023e-9■□□□□ 11.2
DROSHAQ9NRR4 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.923e-9■□□□□ 11.2
DROSHAQ9NRR4 HSP90AA1-208ENST00000557234 584 ntTSL 329.23■■■□□ 2.271e-11■□□□□ 11.2
DROSHAQ9NRR4 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.761e-11■□□□□ 11.2
DROSHAQ9NRR4 HSP90AA1-202ENST00000334701 3510 ntTSL 1 (best) BASIC17.17■□□□□ 0.341e-11■□□□□ 11.2
DROSHAQ9NRR4 HSP90AA1-203ENST00000553585 581 ntTSL 39.65□□□□□ -0.861e-11■□□□□ 11.2
DROSHAQ9NRR4 HSP90AA1-206ENST00000556554 552 ntTSL 29.53□□□□□ -0.881e-11■□□□□ 11.2
DROSHAQ9NRR4 DYRK1A-207ENST00000462274 1189 ntTSL 1 (best)39.55■■■■□ 3.921e-6■□□□□ 11.2
DROSHAQ9NRR4 PFKP-207ENST00000421751 658 ntTSL 424.18■■□□□ 1.463e-6■□□□□ 11.2
DROSHAQ9NRR4 PFKP-204ENST00000407806 705 ntTSL 521.56■■□□□ 1.043e-6■□□□□ 11.2
DROSHAQ9NRR4 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC10.19□□□□□ -0.788e-24■□□□□ 11.2
DROSHAQ9NRR4 JUND-202ENST00000600972 500 ntTSL 239.32■■■■□ 3.881e-11■□□□□ 11.2
DROSHAQ9NRR4 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC27.87■■■□□ 2.051e-11■□□□□ 11.2
DROSHAQ9NRR4 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.981e-11■□□□□ 11.2
DROSHAQ9NRR4 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.461e-11■□□□□ 11.2
DROSHAQ9NRR4 ATP5J-208ENST00000486002 876 ntTSL 224.16■■□□□ 1.461e-11■□□□□ 11.2
DROSHAQ9NRR4 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.891e-11■□□□□ 11.2
DROSHAQ9NRR4 ATP5J-204ENST00000400093 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.781e-11■□□□□ 11.2
DROSHAQ9NRR4 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC10.62□□□□□ -0.711e-11■□□□□ 11.2
DROSHAQ9NRR4 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC8.7□□□□□ -1.021e-11■□□□□ 11.2
DROSHAQ9NRR4 ATP5A1-205ENST00000586592 2214 ntTSL 234.29■■■■□ 3.081e-7■□□□□ 11.2
DROSHAQ9NRR4 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC33.28■■■□□ 2.921e-7■□□□□ 11.2
DROSHAQ9NRR4 ATP5A1-216ENST00000591267 460 ntTSL 532.56■■■□□ 2.81e-7■□□□□ 11.2
DROSHAQ9NRR4 ATP5A1-207ENST00000588390 556 ntTSL 1 (best)30.03■■■□□ 2.41e-7■□□□□ 11.2
DROSHAQ9NRR4 ATP5A1-208ENST00000589252 662 ntTSL 530.03■■■□□ 2.41e-7■□□□□ 11.2
DROSHAQ9NRR4 ATP5A1-213ENST00000590406 756 ntTSL 330.03■■■□□ 2.41e-7■□□□□ 11.2
DROSHAQ9NRR4 ATP5A1-210ENST00000589869 910 ntTSL 323.49■■□□□ 1.351e-7■□□□□ 11.2
DROSHAQ9NRR4 ATP5A1-217ENST00000591981 565 ntTSL 422.42■■□□□ 1.181e-7■□□□□ 11.2
DROSHAQ9NRR4 ATP5A1-211ENST00000590156 1931 ntTSL 221.97■■□□□ 1.111e-7■□□□□ 11.2
DROSHAQ9NRR4 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC20.64■□□□□ 0.891e-7■□□□□ 11.2
DROSHAQ9NRR4 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.891e-7■□□□□ 11.2
DROSHAQ9NRR4 ATP5A1-218ENST00000592364 576 ntTSL 520.24■□□□□ 0.831e-7■□□□□ 11.2
DROSHAQ9NRR4 ATP5A1-214ENST00000590448 604 ntTSL 219.83■□□□□ 0.771e-7■□□□□ 11.2
DROSHAQ9NRR4 ATP5A1-219ENST00000592989 553 ntTSL 516.14■□□□□ 0.171e-7■□□□□ 11.2
DROSHAQ9NRR4 ATP5A1-212ENST00000590324 807 ntTSL 515.25■□□□□ 0.031e-7■□□□□ 11.2
DROSHAQ9NRR4 ATP5A1-202ENST00000398752 5818 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.471e-7■□□□□ 11.2
DROSHAQ9NRR4 ATP5A1-203ENST00000585650 520 ntTSL 510.5□□□□□ -0.731e-7■□□□□ 11.2
DROSHAQ9NRR4 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.054e-7■□□□□ 11.2
DROSHAQ9NRR4 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.024e-6■□□□□ 11.2
DROSHAQ9NRR4 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC35.26■■■■□ 3.242e-14■□□□□ 11.1
DROSHAQ9NRR4 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC31.66■■■□□ 2.662e-14■□□□□ 11.1
DROSHAQ9NRR4 PDIA6-206ENST00000489662 564 ntTSL 420.5■□□□□ 0.872e-14■□□□□ 11.1
DROSHAQ9NRR4 PDIA6-204ENST00000404824 2236 ntTSL 2 BASIC18.03■□□□□ 0.482e-14■□□□□ 11.1
DROSHAQ9NRR4 PDIA6-208ENST00000617249 2344 ntTSL 5 BASIC17.1■□□□□ 0.332e-14■□□□□ 11.1
DROSHAQ9NRR4 PDIA6-202ENST00000381611 2534 ntTSL 2 BASIC14.62□□□□□ -0.072e-14■□□□□ 11.1
DROSHAQ9NRR4 PDIA6-203ENST00000404371 2682 ntTSL 2 BASIC14.55□□□□□ -0.082e-14■□□□□ 11.1
DROSHAQ9NRR4 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC43.04■■■■■ 4.483e-9■□□□□ 11.1
DROSHAQ9NRR4 SSBP4-203ENST00000593641 900 ntTSL 535.63■■■■□ 3.293e-9■□□□□ 11.1
DROSHAQ9NRR4 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.12e-6■□□□□ 11.1
DROSHAQ9NRR4 GRAMD1A-207ENST00000598118 2277 ntTSL 1 (best)28.5■■■□□ 2.152e-9■□□□□ 11.1
DROSHAQ9NRR4 SQSTM1-204ENST00000453046 572 ntTSL 427.69■■■□□ 2.021e-6■□□□□ 11.1
DROSHAQ9NRR4 SQSTM1-209ENST00000504627 602 ntTSL 527.69■■■□□ 2.021e-6■□□□□ 11.1
DROSHAQ9NRR4 SQSTM1-212ENST00000508284 578 ntTSL 427.69■■■□□ 2.021e-6■□□□□ 11.1
DROSHAQ9NRR4 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.611e-6■□□□□ 11.1
DROSHAQ9NRR4 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC23.65■■□□□ 1.381e-6■□□□□ 11.1
DROSHAQ9NRR4 SQSTM1-205ENST00000464493 532 ntTSL 422.2■■□□□ 1.141e-6■□□□□ 11.1
DROSHAQ9NRR4 SQSTM1-207ENST00000481335 562 ntTSL 418.82■□□□□ 0.61e-6■□□□□ 11.1
DROSHAQ9NRR4 SQSTM1-203ENST00000422245 628 ntTSL 418■□□□□ 0.471e-6■□□□□ 11.1
DROSHAQ9NRR4 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC23.39■■□□□ 1.334e-6■□□□□ 11.1
DROSHAQ9NRR4 STAG3L5P-PVRIG2P-PILRB-203ENST00000470714 868 ntTSL 325.81■■□□□ 1.726e-21■□□□□ 11.1
DROSHAQ9NRR4 STAG3L5P-PVRIG2P-PILRB-205ENST00000483329 819 ntTSL 518.88■□□□□ 0.616e-21■□□□□ 11.1
DROSHAQ9NRR4 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC21.26■□□□□ 0.993e-43■□□□□ 11.1
DROSHAQ9NRR4 NCAPG2-201ENST00000356309 3930 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.431e-7■□□□□ 11.1
DROSHAQ9NRR4 NCAPG2-203ENST00000409423 3957 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.051e-7■□□□□ 11.1
Retrieved 100 of 16,331 protein–RNA pairs in 78.6 ms