Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC12.01□□□□□ -0.49
Smco4Q9JIS3 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smco4Q9JIS3 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smco4Q9JIS3 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Smco4Q9JIS3 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Smco4Q9JIS3 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smco4Q9JIS3 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Smco4Q9JIS3 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC12.01□□□□□ -0.49
Smco4Q9JIS3 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC12.01□□□□□ -0.49
Smco4Q9JIS3 Gm2559-201ENSMUST00000201323 363 ntBASIC12.01□□□□□ -0.49
Smco4Q9JIS3 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC12.01□□□□□ -0.49
Smco4Q9JIS3 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smco4Q9JIS3 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smco4Q9JIS3 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Smco4Q9JIS3 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Smco4Q9JIS3 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smco4Q9JIS3 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smco4Q9JIS3 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smco4Q9JIS3 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Smco4Q9JIS3 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smco4Q9JIS3 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smco4Q9JIS3 Gm6190-201ENSMUST00000220683 1374 ntBASIC12.01□□□□□ -0.49
Smco4Q9JIS3 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.01□□□□□ -0.49
Smco4Q9JIS3 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Smco4Q9JIS3 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Smco4Q9JIS3 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smco4Q9JIS3 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Smco4Q9JIS3 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Smco4Q9JIS3 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smco4Q9JIS3 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.01□□□□□ -0.49
Smco4Q9JIS3 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smco4Q9JIS3 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smco4Q9JIS3 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Smco4Q9JIS3 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smco4Q9JIS3 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Smco4Q9JIS3 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12□□□□□ -0.49
Smco4Q9JIS3 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smco4Q9JIS3 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC12□□□□□ -0.49
Smco4Q9JIS3 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smco4Q9JIS3 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Smco4Q9JIS3 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Smco4Q9JIS3 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC12□□□□□ -0.49
Smco4Q9JIS3 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smco4Q9JIS3 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12□□□□□ -0.49
Smco4Q9JIS3 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Smco4Q9JIS3 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Smco4Q9JIS3 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12□□□□□ -0.49
Smco4Q9JIS3 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smco4Q9JIS3 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC12□□□□□ -0.49
Smco4Q9JIS3 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC12□□□□□ -0.49
Smco4Q9JIS3 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC12□□□□□ -0.49
Smco4Q9JIS3 Gm9731-201ENSMUST00000209480 747 ntBASIC12□□□□□ -0.49
Smco4Q9JIS3 Gm10033-202ENSMUST00000211874 928 ntBASIC12□□□□□ -0.49
Smco4Q9JIS3 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smco4Q9JIS3 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smco4Q9JIS3 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smco4Q9JIS3 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smco4Q9JIS3 Gm11405-201ENSMUST00000118689 1556 ntBASIC12□□□□□ -0.49
Smco4Q9JIS3 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC12□□□□□ -0.49
Smco4Q9JIS3 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smco4Q9JIS3 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Smco4Q9JIS3 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12□□□□□ -0.49
Smco4Q9JIS3 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smco4Q9JIS3 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Smco4Q9JIS3 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC12□□□□□ -0.49
Smco4Q9JIS3 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Smco4Q9JIS3 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smco4Q9JIS3 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Smco4Q9JIS3 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smco4Q9JIS3 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smco4Q9JIS3 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smco4Q9JIS3 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smco4Q9JIS3 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smco4Q9JIS3 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Smco4Q9JIS3 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC11.99□□□□□ -0.49
Smco4Q9JIS3 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Smco4Q9JIS3 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC11.99□□□□□ -0.49
Smco4Q9JIS3 Gm18025-201ENSMUST00000221733 862 ntBASIC11.99□□□□□ -0.49
Smco4Q9JIS3 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smco4Q9JIS3 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Smco4Q9JIS3 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smco4Q9JIS3 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smco4Q9JIS3 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smco4Q9JIS3 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smco4Q9JIS3 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smco4Q9JIS3 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Smco4Q9JIS3 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smco4Q9JIS3 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Smco4Q9JIS3 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Smco4Q9JIS3 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smco4Q9JIS3 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smco4Q9JIS3 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smco4Q9JIS3 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smco4Q9JIS3 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Smco4Q9JIS3 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smco4Q9JIS3 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smco4Q9JIS3 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smco4Q9JIS3 Carlr-201ENSMUST00000181515 2574 ntBASIC11.98□□□□□ -0.49
Smco4Q9JIS3 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smco4Q9JIS3 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms