Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tubb3Q9ERD7 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tubb3Q9ERD7 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Tubb3Q9ERD7 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.82□□□□□ -0.04
Tubb3Q9ERD7 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tubb3Q9ERD7 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tubb3Q9ERD7 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Tubb3Q9ERD7 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.82□□□□□ -0.04
Tubb3Q9ERD7 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tubb3Q9ERD7 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Tubb3Q9ERD7 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tubb3Q9ERD7 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tubb3Q9ERD7 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
Tubb3Q9ERD7 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tubb3Q9ERD7 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Tubb3Q9ERD7 Gm9727-201ENSMUST00000161387 555 ntBASIC14.82□□□□□ -0.04
Tubb3Q9ERD7 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tubb3Q9ERD7 Gm5682-201ENSMUST00000173402 505 ntBASIC14.82□□□□□ -0.04
Tubb3Q9ERD7 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Tubb3Q9ERD7 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Tubb3Q9ERD7 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tubb3Q9ERD7 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tubb3Q9ERD7 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tubb3Q9ERD7 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tubb3Q9ERD7 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tubb3Q9ERD7 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.82□□□□□ -0.04
Tubb3Q9ERD7 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tubb3Q9ERD7 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tubb3Q9ERD7 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Tubb3Q9ERD7 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tubb3Q9ERD7 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tubb3Q9ERD7 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Tubb3Q9ERD7 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Tubb3Q9ERD7 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tubb3Q9ERD7 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tubb3Q9ERD7 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tubb3Q9ERD7 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tubb3Q9ERD7 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tubb3Q9ERD7 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tubb3Q9ERD7 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Tubb3Q9ERD7 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.81□□□□□ -0.04
Tubb3Q9ERD7 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.81□□□□□ -0.04
Tubb3Q9ERD7 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tubb3Q9ERD7 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Tubb3Q9ERD7 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC14.81□□□□□ -0.04
Tubb3Q9ERD7 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
Tubb3Q9ERD7 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.81□□□□□ -0.04
Tubb3Q9ERD7 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.81□□□□□ -0.04
Tubb3Q9ERD7 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.81□□□□□ -0.04
Tubb3Q9ERD7 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tubb3Q9ERD7 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Tubb3Q9ERD7 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Tubb3Q9ERD7 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC14.81□□□□□ -0.04
Tubb3Q9ERD7 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.81□□□□□ -0.04
Tubb3Q9ERD7 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC14.81□□□□□ -0.04
Tubb3Q9ERD7 Gm19164-201ENSMUST00000210667 640 ntBASIC14.81□□□□□ -0.04
Tubb3Q9ERD7 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Tubb3Q9ERD7 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tubb3Q9ERD7 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tubb3Q9ERD7 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tubb3Q9ERD7 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Tubb3Q9ERD7 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tubb3Q9ERD7 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tubb3Q9ERD7 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tubb3Q9ERD7 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Tubb3Q9ERD7 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tubb3Q9ERD7 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tubb3Q9ERD7 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Tubb3Q9ERD7 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.81□□□□□ -0.04
Tubb3Q9ERD7 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tubb3Q9ERD7 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tubb3Q9ERD7 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Tubb3Q9ERD7 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tubb3Q9ERD7 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Tubb3Q9ERD7 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Tubb3Q9ERD7 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tubb3Q9ERD7 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tubb3Q9ERD7 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tubb3Q9ERD7 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tubb3Q9ERD7 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tubb3Q9ERD7 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.8□□□□□ -0.04
Tubb3Q9ERD7 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tubb3Q9ERD7 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tubb3Q9ERD7 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.8□□□□□ -0.04
Tubb3Q9ERD7 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tubb3Q9ERD7 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tubb3Q9ERD7 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.8□□□□□ -0.04
Tubb3Q9ERD7 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Tubb3Q9ERD7 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tubb3Q9ERD7 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tubb3Q9ERD7 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC14.8□□□□□ -0.04
Tubb3Q9ERD7 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tubb3Q9ERD7 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC14.8□□□□□ -0.04
Tubb3Q9ERD7 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC14.8□□□□□ -0.04
Tubb3Q9ERD7 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.8□□□□□ -0.04
Tubb3Q9ERD7 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Tubb3Q9ERD7 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tubb3Q9ERD7 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Tubb3Q9ERD7 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Tubb3Q9ERD7 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms