Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chmp4cQ9D7F7 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chmp4cQ9D7F7 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp4cQ9D7F7 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp4cQ9D7F7 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp4cQ9D7F7 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp4cQ9D7F7 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp4cQ9D7F7 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC17.86■□□□□ 0.45
Chmp4cQ9D7F7 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp4cQ9D7F7 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp4cQ9D7F7 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp4cQ9D7F7 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp4cQ9D7F7 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp4cQ9D7F7 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp4cQ9D7F7 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp4cQ9D7F7 Gm11185-201ENSMUST00000117732 1007 ntBASIC17.86■□□□□ 0.45
Chmp4cQ9D7F7 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC17.86■□□□□ 0.45
Chmp4cQ9D7F7 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Chmp4cQ9D7F7 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC17.86■□□□□ 0.45
Chmp4cQ9D7F7 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp4cQ9D7F7 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC17.86■□□□□ 0.45
Chmp4cQ9D7F7 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC17.86■□□□□ 0.45
Chmp4cQ9D7F7 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp4cQ9D7F7 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp4cQ9D7F7 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC17.86■□□□□ 0.45
Chmp4cQ9D7F7 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp4cQ9D7F7 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp4cQ9D7F7 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp4cQ9D7F7 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp4cQ9D7F7 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp4cQ9D7F7 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Chmp4cQ9D7F7 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC17.86■□□□□ 0.45
Chmp4cQ9D7F7 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp4cQ9D7F7 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC17.85■□□□□ 0.45
Chmp4cQ9D7F7 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp4cQ9D7F7 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp4cQ9D7F7 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC17.85■□□□□ 0.45
Chmp4cQ9D7F7 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp4cQ9D7F7 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp4cQ9D7F7 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Chmp4cQ9D7F7 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
Chmp4cQ9D7F7 Gm5682-201ENSMUST00000173402 505 ntBASIC17.85■□□□□ 0.45
Chmp4cQ9D7F7 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC17.85■□□□□ 0.45
Chmp4cQ9D7F7 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp4cQ9D7F7 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC17.85■□□□□ 0.45
Chmp4cQ9D7F7 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC17.85■□□□□ 0.45
Chmp4cQ9D7F7 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp4cQ9D7F7 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp4cQ9D7F7 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp4cQ9D7F7 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC17.85■□□□□ 0.45
Chmp4cQ9D7F7 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp4cQ9D7F7 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp4cQ9D7F7 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp4cQ9D7F7 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp4cQ9D7F7 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp4cQ9D7F7 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp4cQ9D7F7 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Chmp4cQ9D7F7 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Chmp4cQ9D7F7 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chmp4cQ9D7F7 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chmp4cQ9D7F7 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chmp4cQ9D7F7 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Chmp4cQ9D7F7 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chmp4cQ9D7F7 Gm15173-201ENSMUST00000122049 433 ntBASIC17.84■□□□□ 0.45
Chmp4cQ9D7F7 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC17.84■□□□□ 0.45
Chmp4cQ9D7F7 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chmp4cQ9D7F7 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
Chmp4cQ9D7F7 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chmp4cQ9D7F7 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chmp4cQ9D7F7 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Chmp4cQ9D7F7 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
Chmp4cQ9D7F7 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Chmp4cQ9D7F7 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Chmp4cQ9D7F7 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC17.83■□□□□ 0.45
Chmp4cQ9D7F7 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Chmp4cQ9D7F7 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Chmp4cQ9D7F7 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC17.83■□□□□ 0.45
Chmp4cQ9D7F7 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Chmp4cQ9D7F7 Gm5357-201ENSMUST00000212720 1924 ntBASIC17.83■□□□□ 0.44
Chmp4cQ9D7F7 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC17.83■□□□□ 0.44
Chmp4cQ9D7F7 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Chmp4cQ9D7F7 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC17.83■□□□□ 0.44
Chmp4cQ9D7F7 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Chmp4cQ9D7F7 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Chmp4cQ9D7F7 Gm38318-201ENSMUST00000195769 1706 ntBASIC17.83■□□□□ 0.44
Chmp4cQ9D7F7 Gm5184-201ENSMUST00000220417 1702 ntBASIC17.83■□□□□ 0.44
Chmp4cQ9D7F7 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Chmp4cQ9D7F7 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC17.83■□□□□ 0.44
Chmp4cQ9D7F7 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Chmp4cQ9D7F7 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Chmp4cQ9D7F7 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Chmp4cQ9D7F7 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Chmp4cQ9D7F7 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC17.82■□□□□ 0.44
Chmp4cQ9D7F7 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chmp4cQ9D7F7 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chmp4cQ9D7F7 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chmp4cQ9D7F7 Gm37500-201ENSMUST00000192059 1443 ntBASIC17.82■□□□□ 0.44
Chmp4cQ9D7F7 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chmp4cQ9D7F7 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chmp4cQ9D7F7 Gm17971-201ENSMUST00000190239 806 ntBASIC17.82■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms