Protein–RNA interactions for Protein: Q9D032

Ssbp3, Single-stranded DNA-binding protein 3, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp3Q9D032 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ssbp3Q9D032 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ssbp3Q9D032 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC12.44□□□□□ -0.42
Ssbp3Q9D032 Gm15427-201ENSMUST00000117288 531 ntBASIC12.44□□□□□ -0.42
Ssbp3Q9D032 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC12.44□□□□□ -0.42
Ssbp3Q9D032 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Ssbp3Q9D032 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ssbp3Q9D032 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ssbp3Q9D032 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ssbp3Q9D032 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ssbp3Q9D032 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC12.44□□□□□ -0.42
Ssbp3Q9D032 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC12.44□□□□□ -0.42
Ssbp3Q9D032 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Ssbp3Q9D032 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ssbp3Q9D032 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ssbp3Q9D032 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ssbp3Q9D032 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ssbp3Q9D032 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ssbp3Q9D032 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ssbp3Q9D032 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Ssbp3Q9D032 Gm13410-201ENSMUST00000117058 1415 ntBASIC12.44□□□□□ -0.42
Ssbp3Q9D032 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ssbp3Q9D032 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
Ssbp3Q9D032 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
Ssbp3Q9D032 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ssbp3Q9D032 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ssbp3Q9D032 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssbp3Q9D032 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssbp3Q9D032 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssbp3Q9D032 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC12.43□□□□□ -0.42
Ssbp3Q9D032 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssbp3Q9D032 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssbp3Q9D032 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssbp3Q9D032 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssbp3Q9D032 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssbp3Q9D032 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC12.43□□□□□ -0.42
Ssbp3Q9D032 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssbp3Q9D032 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ssbp3Q9D032 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssbp3Q9D032 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssbp3Q9D032 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC12.43□□□□□ -0.42
Ssbp3Q9D032 Gm23935-201ENSMUST00000102303 57 ntBASIC12.43□□□□□ -0.42
Ssbp3Q9D032 Gm24270-201ENSMUST00000102326 57 ntBASIC12.43□□□□□ -0.42
Ssbp3Q9D032 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC12.43□□□□□ -0.42
Ssbp3Q9D032 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC12.43□□□□□ -0.42
Ssbp3Q9D032 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssbp3Q9D032 Gm24245-201ENSMUST00000157318 57 ntBASIC12.43□□□□□ -0.42
Ssbp3Q9D032 Gm2272-201ENSMUST00000194903 582 ntBASIC12.43□□□□□ -0.42
Ssbp3Q9D032 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC12.43□□□□□ -0.42
Ssbp3Q9D032 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC12.43□□□□□ -0.42
Ssbp3Q9D032 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Ssbp3Q9D032 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Ssbp3Q9D032 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC12.43□□□□□ -0.42
Ssbp3Q9D032 CT010506.4-201ENSMUST00000225457 351 ntBASIC12.43□□□□□ -0.42
Ssbp3Q9D032 CT009510.1-201ENSMUST00000227972 270 ntBASIC12.43□□□□□ -0.42
Ssbp3Q9D032 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssbp3Q9D032 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssbp3Q9D032 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ssbp3Q9D032 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC12.43□□□□□ -0.42
Ssbp3Q9D032 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssbp3Q9D032 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
Ssbp3Q9D032 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssbp3Q9D032 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssbp3Q9D032 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssbp3Q9D032 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssbp3Q9D032 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Ssbp3Q9D032 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssbp3Q9D032 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssbp3Q9D032 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC12.43□□□□□ -0.42
Ssbp3Q9D032 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssbp3Q9D032 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ssbp3Q9D032 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC12.42□□□□□ -0.42
Ssbp3Q9D032 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ssbp3Q9D032 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ssbp3Q9D032 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ssbp3Q9D032 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ssbp3Q9D032 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ssbp3Q9D032 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ssbp3Q9D032 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ssbp3Q9D032 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ssbp3Q9D032 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ssbp3Q9D032 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC12.42□□□□□ -0.42
Ssbp3Q9D032 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Ssbp3Q9D032 Gm26308-201ENSMUST00000157768 69 ntBASIC12.42□□□□□ -0.42
Ssbp3Q9D032 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC12.42□□□□□ -0.42
Ssbp3Q9D032 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Ssbp3Q9D032 AC151286.1-201ENSMUST00000198489 145 ntBASIC12.42□□□□□ -0.42
Ssbp3Q9D032 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Ssbp3Q9D032 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ssbp3Q9D032 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Ssbp3Q9D032 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC12.42□□□□□ -0.42
Ssbp3Q9D032 Gm10154-201ENSMUST00000084445 354 ntBASIC12.42□□□□□ -0.42
Ssbp3Q9D032 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC12.42□□□□□ -0.42
Ssbp3Q9D032 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ssbp3Q9D032 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ssbp3Q9D032 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ssbp3Q9D032 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ssbp3Q9D032 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ssbp3Q9D032 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC12.42□□□□□ -0.42
Ssbp3Q9D032 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms